Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G510100.1 | Wheat | cytosol | 95.43 | 76.26 |
| TraesCS3B01G578200.1 | Wheat | cytosol | 95.43 | 73.57 |
| HORVU3Hr1G112010.1 | Barley | cytosol, nucleus, plastid | 92.57 | 64.8 |
| TraesCS3D01G517400.1 | Wheat | cytosol | 77.71 | 61.82 |
| TraesCS3D01G517300.1 | Wheat | cytosol | 76.0 | 61.01 |
| Os01t0963600-01 | Rice | extracellular | 56.0 | 53.85 |
| TraesCS3D01G517200.1 | Wheat | cytosol | 45.71 | 49.69 |
| Zm00001d011813_P001 | Maize | extracellular | 46.86 | 45.3 |
| KXG34187 | Sorghum | cytosol, mitochondrion, nucleus | 48.0 | 45.16 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G517100.1 | EnsemblPlantsGene:TraesCS3D01G517100 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS | PANTHER:PTHR33801 |
| PANTHER:PTHR33801:SF8 | PFAM:PF02496 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3D:+:600563453..600564143
Molecular Weight (calculated)
18857.3 Da
IEP (calculated)
7.024
GRAVY (calculated)
-1.106
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSNTTDDCY DAGKHGHGHG HGHGHGHGYG GGGRTMYSNT VDEECFDSGR HGHGHGHGYG HNDGRAMSYS TTTEECFGGG EQGQGYYKKE VKQHKNRERV
101: GEVGALAAGA FALYEGYEVK KDPAHARKHQ IEAGVAGAAA LGAGGYAYHE HREQKQAAYG GQQEYRMPVH NGYCN
101: GEVGALAAGA FALYEGYEVK KDPAHARKHQ IEAGVAGAAA LGAGGYAYHE HREQKQAAYG GQQEYRMPVH NGYCN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.