Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G219300.1 | Wheat | nucleus | 94.24 | 94.63 |
| TraesCS1D01G393200.1 | Wheat | cytosol | 69.96 | 94.44 |
| TraesCS3B01G249700.1 | Wheat | nucleus | 88.07 | 81.99 |
| TraesCS2D01G563300.1 | Wheat | nucleus | 88.48 | 81.44 |
| TraesCS7D01G338500.1 | Wheat | nucleus, plastid | 26.75 | 13.37 |
| TraesCS5D01G065500.1 | Wheat | nucleus, plastid | 17.28 | 11.7 |
| TraesCS1D01G329200.1 | Wheat | plastid | 17.7 | 11.5 |
| TraesCS2D01G125000.1 | Wheat | plastid | 25.1 | 10.37 |
| TraesCS3D01G297000.1 | Wheat | plastid | 25.93 | 10.24 |
| TraesCS5D01G065300.1 | Wheat | nucleus | 27.16 | 8.63 |
| TraesCS4D01G026100.1 | Wheat | nucleus | 26.75 | 8.26 |
| Bra041164.1-P | Field mustard | nucleus | 2.88 | 7.07 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G233200.1 | EnsemblPlantsGene:TraesCS3D01G233200 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg | SMART:SM01114 | MapMan:15.5.9 |
Description
No Description!
Coordinates
chr3D:+:321871500..321873158
Molecular Weight (calculated)
26174.1 Da
IEP (calculated)
4.494
GRAVY (calculated)
-0.673
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDLPHCTCE KTQCLQRYCH CFEAWVFCDE RCSCQGCRNT EDNSDEVDER AECIMKKKPD AFKPKIIAGD GPGLQQQQQQ QVAGVHVKGC NCRNSECKKL
101: YCECFKHGVG CSDKCQCTGC ANTFGVKGAA QQAHSDSSEG TSGGSGETLA RSNGSSAIVN DDMASQSTEA SIMDDIHIPS ELSDMDVDLG PPNQALGDDG
201: LEDIVFNHSD FHHNVDPQTH EGFAKQGAGS LSNDANSLLQ QGP
101: YCECFKHGVG CSDKCQCTGC ANTFGVKGAA QQAHSDSSEG TSGGSGETLA RSNGSSAIVN DDMASQSTEA SIMDDIHIPS ELSDMDVDLG PPNQALGDDG
201: LEDIVFNHSD FHHNVDPQTH EGFAKQGAGS LSNDANSLLQ QGP
001: MDTPDKNRIS AVSFCNFEDS PVFQYINDLS PIEPVKPGRP ENILHSLVFT SPSSSSSLFC SPQLNSYRDS RFFIKRHRSL DLSSPVVLIG ETLKNSPDAL
101: WEEKLKCRPE KLENVSEPKP FKEQISLAIE LANSLKHGRD GCDIQMVSCD EVPMDADDEI GSGGGSRELS DELCRQSFDP LDFDADSDGV LHTDEMEAES
201: GFGKEVIMFD VADIQNYEQQ IPRTTDPRFY SLASEPQQFS IYCNNSNYVE EREGSCSVQV AAGAPDINLS CSSKVAAIDS TAEAEDKEDK DLQPSGKQRS
301: VRRRCLTFDM GGSHKRIPLR DSTNDLPLDS TSINKAPSPQ NCLDTSKQDT DEILPIPRTI GLHLNGFVNP SVSSGRKKKK IKDGQAFPST TFHYNIEDEF
401: STPVSTKRDL VVFSDVKIME PPERSVEGEC FDQLMAMENR QLSQGLDELG SCKRCKCRKS QCLKLYCECF SAGLFCGEPC SCQNCFNKPI HEDLVMKSRE
501: VIKARNPLAF APKVVSTSDT VIDLWVENSK TPASARHKRG CNCRKSGCSK KYCECFMMGV GCSSNCRCMG CKNTFGHTNE QCAGDSDVVT INDEAKHYGD
601: HGDASRQNEE ILTSERNRLL LPGSVAFRSL TSLSNLSEL
101: WEEKLKCRPE KLENVSEPKP FKEQISLAIE LANSLKHGRD GCDIQMVSCD EVPMDADDEI GSGGGSRELS DELCRQSFDP LDFDADSDGV LHTDEMEAES
201: GFGKEVIMFD VADIQNYEQQ IPRTTDPRFY SLASEPQQFS IYCNNSNYVE EREGSCSVQV AAGAPDINLS CSSKVAAIDS TAEAEDKEDK DLQPSGKQRS
301: VRRRCLTFDM GGSHKRIPLR DSTNDLPLDS TSINKAPSPQ NCLDTSKQDT DEILPIPRTI GLHLNGFVNP SVSSGRKKKK IKDGQAFPST TFHYNIEDEF
401: STPVSTKRDL VVFSDVKIME PPERSVEGEC FDQLMAMENR QLSQGLDELG SCKRCKCRKS QCLKLYCECF SAGLFCGEPC SCQNCFNKPI HEDLVMKSRE
501: VIKARNPLAF APKVVSTSDT VIDLWVENSK TPASARHKRG CNCRKSGCSK KYCECFMMGV GCSSNCRCMG CKNTFGHTNE QCAGDSDVVT INDEAKHYGD
601: HGDASRQNEE ILTSERNRLL LPGSVAFRSL TSLSNLSEL
Arabidopsis Description
TCX4Protein tesmin/TSO1-like CXC 4 [Source:UniProtKB/Swiss-Prot;Acc:Q84JZ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.