Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G341100.2 | Wheat | nucleus, plastid | 97.94 | 97.94 |
| TraesCS7B01G242300.1 | Wheat | nucleus | 96.3 | 96.49 |
| HORVU7Hr1G081540.1 | Barley | plastid | 53.29 | 88.7 |
| Os06t0332700-00 | Rice | nucleus | 40.74 | 65.35 |
| EER89807 | Sorghum | cytosol | 63.79 | 60.9 |
| Zm00001d037461_P001 | Maize | cytosol | 61.52 | 58.51 |
| TraesCS1D01G393200.1 | Wheat | cytosol | 11.32 | 30.56 |
| CDY65712 | Canola | nucleus | 28.6 | 30.35 |
| Bra036551.1-P | Field mustard | nucleus | 28.19 | 30.04 |
| CDY19795 | Canola | nucleus | 27.98 | 29.89 |
| TraesCS3D01G297000.1 | Wheat | plastid | 37.65 | 29.76 |
| AT5G25790.2 | Thale cress | nucleus | 30.04 | 28.97 |
| Bra009859.1-P | Field mustard | nucleus | 30.04 | 28.68 |
| CDX88196 | Canola | nucleus | 30.04 | 28.63 |
| CDX80536 | Canola | nucleus | 29.63 | 27.75 |
| CDY28377 | Canola | nucleus | 18.52 | 27.44 |
| TraesCS3D01G233200.1 | Wheat | nucleus | 13.37 | 26.75 |
| Bra021165.1-P | Field mustard | nucleus | 17.9 | 26.69 |
| AT3G16160.1 | Thale cress | nucleus | 20.16 | 26.63 |
| CDY05340 | Canola | nucleus | 26.13 | 26.57 |
| TraesCS2D01G563300.1 | Wheat | nucleus | 14.4 | 26.52 |
| CDY20184 | Canola | cytosol | 18.31 | 26.18 |
| TraesCS2D01G125000.1 | Wheat | plastid | 29.22 | 24.15 |
| TraesCS5D01G065500.1 | Wheat | nucleus, plastid | 13.79 | 18.66 |
| TraesCS1D01G329200.1 | Wheat | plastid | 13.37 | 17.38 |
| TraesCS5D01G065300.1 | Wheat | nucleus | 17.28 | 10.98 |
| TraesCS4D01G026100.1 | Wheat | nucleus | 17.49 | 10.8 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G338500.1 | EnsemblPlantsGene:TraesCS7D01G338500 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF35 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg | SMART:SM01114 |
| MapMan:15.5.9 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:431930076..431936068
Molecular Weight (calculated)
52956.1 Da
IEP (calculated)
7.657
GRAVY (calculated)
-0.740
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPEQQHNAQ PPAPPAAAPP QPPQPRPVAP MMHSARSWPL SFTPIKPLVE IKSVTPPKRK KQCNCKNSHC LKLYCECFAA GLYCDGCNCK QCGNKVENEH
101: ARQEAINSTK LRNPKAFQPK IENVPSALSV RKDAGAPSVP KHNKGCHCKK SGCLKKYCEC FQANILCSKN CKCMDCKNFE GSEELQAIIQ GDNASDKNNI
201: QQAANVTLNG AIGSSGYKYS PVRRKRHPED PLGPEANHLD ASQVASSSGL EGCIGYQSRS KMVYRSPLAN TIHPTDVNDL ANHLVIVCRK ATETFLTIAD
301: NKVEMEVERG IYTNADLNND KMKNREVQNG GVSQPDVATH IDQRTAGDLE SPCNNTQEDY RPASPGTQAL LCDEQGTAFG SDYRTSFPSA FHDQDTPELS
401: ALQEKTVLTG FRDYLRLLIT RGKINANNSA GLTEANTSSE HAMELDARRN HGATTGPGVS SFPSEAVERP KAPGDPENPR TSDPSA
101: ARQEAINSTK LRNPKAFQPK IENVPSALSV RKDAGAPSVP KHNKGCHCKK SGCLKKYCEC FQANILCSKN CKCMDCKNFE GSEELQAIIQ GDNASDKNNI
201: QQAANVTLNG AIGSSGYKYS PVRRKRHPED PLGPEANHLD ASQVASSSGL EGCIGYQSRS KMVYRSPLAN TIHPTDVNDL ANHLVIVCRK ATETFLTIAD
301: NKVEMEVERG IYTNADLNND KMKNREVQNG GVSQPDVATH IDQRTAGDLE SPCNNTQEDY RPASPGTQAL LCDEQGTAFG SDYRTSFPSA FHDQDTPELS
401: ALQEKTVLTG FRDYLRLLIT RGKINANNSA GLTEANTSSE HAMELDARRN HGATTGPGVS SFPSEAVERP KAPGDPENPR TSDPSA
001: MGEGEEGDKF PPKTDEVTQE SMKSARQLDF TGGSSDVEHS HSNQASSMAA ASIPSPIVTV TRPIITSQAP PTVATPIPPP PQSQGIILHV PIRHPRPESP
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT ANGVSQTAKQ PSQLTTTTTT PNTSSQTHLH KTPALSEKKD L
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT ANGVSQTAKQ PSQLTTTTTT PNTSSQTHLH KTPALSEKKD L
Arabidopsis Description
Tesmin/TSO1-like CXC domain-containing protein [Source:TAIR;Acc:AT2G20110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.