Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037461_P001 | Maize | cytosol | 87.23 | 86.89 |
| Os06t0332700-00 | Rice | nucleus | 41.45 | 69.64 |
| HORVU7Hr1G081540.1 | Barley | plastid | 39.49 | 68.84 |
| TraesCS7D01G338500.1 | Wheat | nucleus, plastid | 60.9 | 63.79 |
| TraesCS7A01G341100.2 | Wheat | nucleus, plastid | 60.51 | 63.37 |
| TraesCS7B01G242300.1 | Wheat | nucleus | 60.31 | 63.3 |
| KXG30022 | Sorghum | nucleus, plastid | 46.56 | 43.65 |
| CDY19795 | Canola | nucleus | 27.9 | 31.21 |
| CDY65712 | Canola | nucleus | 27.9 | 31.0 |
| Bra036551.1-P | Field mustard | nucleus | 27.7 | 30.92 |
| KXG33424 | Sorghum | nucleus | 36.94 | 30.67 |
| Bra009859.1-P | Field mustard | nucleus | 29.27 | 29.27 |
| AT5G25790.2 | Thale cress | nucleus | 28.88 | 29.17 |
| CDX88196 | Canola | nucleus | 29.08 | 29.02 |
| CDX80536 | Canola | nucleus | 29.27 | 28.71 |
| CDY05340 | Canola | nucleus | 26.52 | 28.24 |
| CDY28377 | Canola | nucleus | 17.88 | 27.74 |
| Bra021165.1-P | Field mustard | nucleus | 17.68 | 27.61 |
| CDY20184 | Canola | cytosol | 18.27 | 27.35 |
| AT3G16160.1 | Thale cress | nucleus | 19.25 | 26.63 |
| EES19781 | Sorghum | cytosol | 11.39 | 16.16 |
| EES17352 | Sorghum | nucleus | 12.77 | 15.89 |
| OQU88523 | Sorghum | nucleus | 17.29 | 11.34 |
| EER93767 | Sorghum | nucleus | 16.11 | 10.98 |
| EES17353 | Sorghum | nucleus | 16.31 | 10.82 |
Protein Annotations
| EnsemblPlants:EER89807 | EnsemblPlantsGene:SORBI_3010G147000 | EntrezGene:8073049 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam |
| InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF29 | PFAM:PF03638 | PFscan:PS51634 | ProteinID:EER89807 |
| ProteinID:EER89807.1 | RefSeq:XP_002438440.1 | SEG:seg | SMART:SM01114 | UniParc:UPI0001A89708 | UniProt:C5Z360 |
| MapMan:15.5.9 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:41921725..41927130
Molecular Weight (calculated)
56260.2 Da
IEP (calculated)
7.336
GRAVY (calculated)
-0.758
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEKQQAEP PALVPEAVAE PRAAPQLQQQ PKPAVQVQPS MPVLRPWPME ITLSMKPVVE MKSGTPAKKK KHCNCKNSQC LKLYCECFAA GDYCDGCNCK
101: QCGNTVENEK GRQDAINNTK LRNPNAFQPK IENGPIPPSV RKDAGALPSL PKHNKGCHCK KSGCLKKYCE CFQANILCSK NCKCMDCKNY EGSEELRSTI
201: QGDNSCDRNN LQQAANVALN GAIGSSGYRF SPVRRKRPAE DPHYQRLNVE GSMMQTQFQE ANNVDVSQIT SSTGRDGSTG NFQGRSKLVY RSPLANTIHV
301: TDVNDLANHL VIVCRKAAER FTTIVDNKAE MEIDREICTN TYQKFDENKD VQKDALSQLG KVTNIDQQIV DDSILYCSDT QEDARPASPG TQALLCDEQD
401: LTFGTAHRSP IPIALHDQDI SELHAAQENA VLKEFRNYLR LIIARGKINA EGKSSSGTGM ETDAPRHHES STSLAPVRTE EKTNTTDDPE DPKTSRSFAS
501: NGISTHKLK
101: QCGNTVENEK GRQDAINNTK LRNPNAFQPK IENGPIPPSV RKDAGALPSL PKHNKGCHCK KSGCLKKYCE CFQANILCSK NCKCMDCKNY EGSEELRSTI
201: QGDNSCDRNN LQQAANVALN GAIGSSGYRF SPVRRKRPAE DPHYQRLNVE GSMMQTQFQE ANNVDVSQIT SSTGRDGSTG NFQGRSKLVY RSPLANTIHV
301: TDVNDLANHL VIVCRKAAER FTTIVDNKAE MEIDREICTN TYQKFDENKD VQKDALSQLG KVTNIDQQIV DDSILYCSDT QEDARPASPG TQALLCDEQD
401: LTFGTAHRSP IPIALHDQDI SELHAAQENA VLKEFRNYLR LIIARGKINA EGKSSSGTGM ETDAPRHHES STSLAPVRTE EKTNTTDDPE DPKTSRSFAS
501: NGISTHKLK
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.