CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041445_P007	Maize	golgi, nucleus, plasma membrane	91.0	83.49
Zm00001d031009_P004	Maize	golgi, plasma membrane	89.7	82.69
TraesCS5A01G053800.1	Wheat	nucleus	67.8	67.97
TraesCS5D01G065300.1	Wheat	nucleus	67.14	67.32
TraesCS5B01G062400.1	Wheat	nucleus	67.01	67.19
Os12t0605500-01	Rice	nucleus	66.23	66.84
HORVU5Hr1G012950.1	Barley	nucleus	66.36	66.45
CDY34235	Canola	endoplasmic reticulum, extracellular, vacuole	16.43	44.06
EER93767	Sorghum	nucleus	39.77	40.83
CDY54822	Canola	cytosol, plastid	26.86	37.52
CDY10668	Canola	nucleus, plastid	27.51	36.76
CDY67857	Canola	nucleus, plastid	28.81	36.59
GSMUA_Achr9P10600_001	Banana	nucleus	35.07	36.45
CDY64240	Canola	cytosol, plastid	28.03	36.07
Bra023810.1-P	Field mustard	nucleus, plastid	27.77	35.98
Bra033920.1-P	Field mustard	plastid	26.6	35.48
OQU88523	Sorghum	nucleus	35.85	35.44
GSMUA_Achr8P20460_001	Banana	nucleus	37.03	35.28
Bra036900.1-P	Field mustard	nucleus, plastid	29.47	35.04
CDY29770	Canola	nucleus, plastid	29.47	34.93
CDY64242	Canola	nucleus	11.99	34.85
AT4G14770.1	Thale cress	nucleus	30.51	34.72
VIT_05s0020g03880.t01	Wine grape	nucleus	34.16	34.34
CDY42785	Canola	nucleus, plastid	29.34	34.25
AT3G22760.1	Thale cress	nucleus	26.86	33.83
GSMUA_Achr9P25670_001	Banana	nucleus	36.38	33.66
KRH35487	Soybean	nucleus	32.72	33.03
KRH77830	Soybean	nucleus	33.25	32.95
KRG91344	Soybean	nucleus	33.12	32.82
KRH27657	Soybean	nucleus	33.12	32.82
CDY54821	Canola	nucleus	28.55	32.25
AT3G22780.1	Thale cress	nucleus	27.9	30.79
VIT_14s0030g01800.t01	Wine grape	nucleus	32.2	30.65
Bra033919.1-P	Field mustard	nucleus	28.42	29.14
Solyc09g082500.2.1	Tomato	nucleus	31.29	28.95
PGSC0003DMT400082098	Potato	nucleus	31.16	28.93
CDY10669	Canola	nucleus	28.16	28.88
EES19781	Sorghum	cytosol	12.26	26.18
EES17352	Sorghum	nucleus	13.3	24.94
CDX92957	Canola	nucleus, plastid	28.29	17.85
CDX94892	Canola	nucleus, plastid	28.68	17.73
Bra001884.1-P	Field mustard	nucleus, plastid	28.16	17.66
EER89807	Sorghum	cytosol	10.82	16.31
KXG33424	Sorghum	nucleus	11.99	15.01
KXG30022	Sorghum	nucleus, plastid	10.56	14.92

Protein Annotations

EnsemblPlants:EES17353	EnsemblPlantsGene:SORBI_3008G160600	EntrezGene:8076666	InterPro:CRC	InterPro:IPR005172	InterPro:Lin-54_fam
InterPro:Tesmin/TSO1-like_CXC	PANTHER:PTHR12446	PANTHER:PTHR12446:SF21	PFAM:PF03638	PFscan:PS51634	ProteinID:EES17353
ProteinID:EES17353.1	RefSeq:XP_002443515.1	SEG:seg	SMART:SM01114	unigene:Sbi.14261	UniParc:UPI0001A88319
UniProt:C5YRH0	MapMan:15.5.9	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:59392867..59399783

Molecular Weight (calculated)

82648.4 Da

IEP (calculated)

6.933

GRAVY (calculated)

-0.579

Length

767 amino acids

Sequence
(BLAST)

001: MDTPDRPRAA AAAGFEDSPV FNFINNLSPI PPPKPLDTAH NVQLFKSSDL APVSSIFASP HVNPAKETKV LIRDESVQLP QELHSPSSVR TRICPSGSFR
101: MIRCKDIVSE SCNITCQLNE ASIDSSDHTS NSTGQLSQSI QDAAGSMESN KDQCGDGKTD LTMSQECTGL EGMNLDESGL DKMDSSHSGI VVHENQLSEQ
201: NNDEPAAYNG DYMITHQSSS DMLTLAVTSG TETQPVDDTQ KSDDPYSCES FLDDQPSGYC AQNSVHEPHL YWTGAVEGAA VAYTPQTLPG ALQSQLMPCN
301: KLNEPKDHMP TEQNALPQHL RGMRRRSLFN EKAGVSNKGV DKASDHHPVN STTPKCKTIS GDNSKPLRTP PCALPGIGLH LNALAAIPKE KLEIQSTINE
401: LSNLIGPSGS SPAPSEQIII NDDFNQTTDV ATAEASSQGS PKKKRQKFDN GDGTSCKRCS CKKSKCLKLY CECFAAGVYC SEPCSCIGCL NNQSHTETVL
501: STRQQIESRN PLAFAPKVIH TSESGLELGD FSNKTPASAR HKRGCNCKKS SCLKKYCECF QGGVGCSISC RCEGCKNAFG KREGAAVLGI EEPKQGLEKK
601: NVCVKEEKSE IDKQLVIYQT ADTAPAENVL TTPSMVECRP LACLPPPSSK KSSKKPRSST KLTGHPSRLC NLQAPPKTDI MLSPFENYPE MVLGDSTSDI
701: LNGNSSPQTS VKVVSPNKKR ISPPRMGTRL SPICTIGRKL ILKSIPSFPS LGGDVNNEDP KAKLPAP

Best Arabidopsis Sequence Match ( AT3G22780.1 )
(BLAST)

001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ

Arabidopsis Description

TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.