Factsheet for Bra033920.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10668	Canola	nucleus, plastid	92.7	92.86
CDY54822	Canola	cytosol, plastid	85.04	89.07
Bra023810.1-P	Field mustard	nucleus, plastid	69.39	67.4
AT3G22760.1	Thale cress	nucleus	61.74	58.29
Os03t0638300-01	Rice	cytosol	10.61	53.98
Bra036900.1-P	Field mustard	nucleus, plastid	53.91	48.06
Bra023807.1-P	Field mustard	nucleus	12.52	38.5
Bra033919.1-P	Field mustard	nucleus	49.57	38.1
KRH77830	Soybean	nucleus	48.7	36.18
KRH27657	Soybean	nucleus	47.65	35.4
KRG91344	Soybean	nucleus	45.74	33.98
KRH35487	Soybean	nucleus	44.87	33.95
PGSC0003DMT400082098	Potato	nucleus	45.91	31.96
Solyc09g082500.2.1	Tomato	nucleus	45.74	31.73
GSMUA_Achr9P10600_001	Banana	nucleus	40.0	31.17
Bra025590.1-P	Field mustard	cytosol	7.65	30.99
VIT_14s0030g01800.t01	Wine grape	nucleus	42.61	30.4
GSMUA_Achr8P20460_001	Banana	nucleus	40.87	29.19
Bra001128.1-P	Field mustard	nucleus	26.26	28.98
GSMUA_Achr9P25670_001	Banana	nucleus	40.7	28.23
HORVU5Hr1G012950.1	Barley	nucleus	36.17	27.15
OQU88523	Sorghum	nucleus	36.52	27.06
TraesCS5A01G053800.1	Wheat	nucleus	36.0	27.06
TraesCS5D01G065300.1	Wheat	nucleus	36.0	27.06
TraesCS5B01G062400.1	Wheat	nucleus	35.83	26.93
Os12t0605500-01	Rice	nucleus	35.3	26.71
EES17353	Sorghum	nucleus	35.48	26.6
TraesCS4D01G026100.1	Wheat	nucleus	36.17	26.43
Os07t0176200-01	Rice	nucleus	35.65	26.21
TraesCS4B01G028500.1	Wheat	nucleus	35.65	25.98
TraesCS4A01G284600.2	Wheat	nucleus	36.35	24.97
EER93767	Sorghum	nucleus	32.17	24.77
Zm00001d018930_P003	Maize	nucleus	35.48	24.7
Zm00001d041445_P007	Maize	golgi, nucleus, plasma membrane	35.13	24.16
Zm00001d031009_P004	Maize	golgi, plasma membrane	34.96	24.16
Zm00001d033274_P005	Maize	nucleus	30.61	23.98
Bra001884.1-P	Field mustard	nucleus, plastid	47.3	22.24
HORVU4Hr1G004280.15	Barley	nucleus, plastid	35.48	22.1
Bra021165.1-P	Field mustard	nucleus	11.13	19.63
Bra036551.1-P	Field mustard	nucleus	15.48	19.52
Bra041164.1-P	Field mustard	nucleus	3.3	19.19
Bra009859.1-P	Field mustard	nucleus	16.35	18.47
Bra041042.1-P	Field mustard	nucleus	15.13	17.3
Bra011075.1-P	Field mustard	nucleus	14.61	15.91
Bra010348.1-P	Field mustard	nucleus	15.13	15.16
Bra024171.1-P	Field mustard	nucleus	13.91	14.49

Protein Annotations

EnsemblPlants:Bra033920.1	EnsemblPlants:Bra033920.1-P	EnsemblPlantsGene:Bra033920	InterPro:CRC	InterPro:IPR005172	InterPro:Lin-54_fam
InterPro:Tesmin/TSO1-like_CXC	PANTHER:PTHR12446	PANTHER:PTHR12446:SF21	PFAM:PF03638	PFscan:PS51634	SEG:seg
SMART:SM01114	UniParc:UPI0002547437	UniProt:M4EYM8	MapMan:15.5.9	:	:

Description

AT3G22760 (E=8e-098) SOL1 | SOL1; transcription factor

Coordinates

chrA05:-:15246535..15248777

Molecular Weight (calculated)

63436.3 Da

IEP (calculated)

8.341

GRAVY (calculated)

-0.539

Length

575 amino acids

Sequence
(BLAST)

001: MQNSPVFNYI NSLSPIKPVR SLPIAQTFGS LSYSSPPSVF TSPHVSSHKG SRFKSDHNHV PASVGDEEAL HETEPPQILQ NECTTDLLKM CDGNVKQKSE
101: TPDWDAMISD SSDILIFDSM YDSEASRCFL ERPSDSKTRS LGVAKSTLEP VINSNDALRR GVRRRCLDFD QTSVASSSRC VVPSIGLHFN AIALSSKDNN
201: SGNEYPLSGN TELGLQGSIT PVLNSQDNVR ENETREDAGQ GVEECPKSLA LVELNQSSPK KKRQVSPLHI FLCKSLSIFH NQMLALQFTR RKFGQAGEGE
301: SSCKRCNCKR SKCLKLYCEC FAAGVYCIGP CSCVDCFNKP IHEDIVMATR KQIESRNPLA FAPKVIRNSD SIMEVGDDAT SKTPASARHK RGCNCKKSNC
401: LKKYCECYQS GVGCSINCRC EGCKNAFGRK DVSAGSSFTS MDKENETSSR GRTEKQPSTP MPLRQPLAQL PISSNNMLLT HHHLHGASGS SLHMSQSFRR
501: QDMSLMSHSK IGTITEERAE NIENLIESPM TNMINAVSPN SKRVSLPMEL SPWRRNGGRK LLLSIPTFPS LTPHH

Best Arabidopsis Sequence Match ( AT3G22760.1 )
(BLAST)

001: MDTPEKSETQ IGTPVSKLKV EDSPVFSYIC NLSPIKTIKP IPITCPLSSL NYASPPSVFT SPHAVSHKES RFRSQKDVSA SKEVGEEEAL VGSEPEQSYK
101: NDCNTPRVTN DVKDNGCGKD LQVMMDNVKK KSDTPDWETL IAATTELIYG SPRESEAFSC LLKKTSNSEA RLRGSITATS VAVTNTDVVN NESESVDALS
201: ILHRGVRRRC LDFEVKGNNQ QTLGESSSSC VVPSIGLHLN TIAMSSKDKN VANEYSFSGN IKVGVQSSLT PVLHSQHDIV RENESGKDSG QIIEVVPKSL
301: ASVDLTPISP KKKRRKSEQS GEGDSSCKRC NCKKSKCLKL YCECFAAGFY CIEPCSCINC FNKPIHKDVV LATRKQIESR NPLAFAPKVI RNSDSIIEVG
401: EDASKTPASA RHKRGCNCKK SNCLKKYCEC YQGGVGCSIN CRCEGCKNAF GRKDGSLFEQ DEENETSGTP GTKKTQQNVE LFKPAAPPST PIPFRQPLAQ
501: LPISSNNRLL PPQSHFHHGA IGSSSSGIYN IRKPDMSLLS HSRIETITED IDDMSENLIH SPITTLSPNS KRVSLSHLDS PESTPWRRNG GGRNLIRSFP
601: TFPSLTPHH

Arabidopsis Description

TCX3Protein tesmin/TSO1-like CXC 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.