Factsheet for Bra036551.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19795	Canola	nucleus	96.27	96.48
Bra009859.1-P	Field mustard	nucleus	73.68	66.01
AT5G25790.2	Thale cress	nucleus	64.04	57.94
Bra025590.1-P	Field mustard	cytosol	15.57	50.0
HORVU7Hr1G081540.1	Barley	plastid	25.0	39.04
Os06t0332700-00	Rice	nucleus	23.46	35.31
Bra041042.1-P	Field mustard	nucleus	36.62	33.2
Bra041164.1-P	Field mustard	nucleus	6.8	31.31
Os02t0274600-00	Rice	cytosol, nucleus	29.61	30.89
Bra011075.1-P	Field mustard	nucleus	34.21	29.55
Bra021165.1-P	Field mustard	nucleus	21.05	29.45
Bra024171.1-P	Field mustard	nucleus	34.87	28.8
Bra010348.1-P	Field mustard	nucleus	35.53	28.22
TraesCS7A01G341100.2	Wheat	nucleus, plastid	30.04	28.19
TraesCS7D01G338500.1	Wheat	nucleus, plastid	30.04	28.19
EER89807	Sorghum	cytosol	30.92	27.7
TraesCS7B01G242300.1	Wheat	nucleus	29.39	27.63
Zm00001d037461_P001	Maize	cytosol	30.7	27.4
Os08t0369600-01	Rice	cytosol, nucleus, peroxisome	20.18	24.93
Zm00001d015990_P001	Maize	nucleus	28.95	24.91
Os08t0363900-00	Rice	cytosol	19.08	24.51
KXG30022	Sorghum	nucleus, plastid	28.95	24.31
TraesCS2B01G144400.2	Wheat	plastid	29.61	22.92
TraesCS2A01G122300.2	Wheat	plastid	29.17	22.62
HORVU2Hr1G021360.2	Barley	plastid	30.04	22.5
TraesCS2D01G125000.1	Wheat	plastid	28.51	22.11
Bra023810.1-P	Field mustard	nucleus, plastid	20.83	16.05
Bra023807.1-P	Field mustard	nucleus	6.36	15.51
Bra033920.1-P	Field mustard	plastid	19.52	15.48
Bra036900.1-P	Field mustard	nucleus, plastid	21.05	14.88
Bra001128.1-P	Field mustard	nucleus	16.01	14.01
Bra033919.1-P	Field mustard	nucleus	20.61	12.57
Bra001884.1-P	Field mustard	nucleus, plastid	20.18	7.52

Protein Annotations

EnsemblPlants:Bra036551.1	EnsemblPlants:Bra036551.1-P	EnsemblPlantsGene:Bra036551	InterPro:CRC	InterPro:IPR005172	InterPro:Lin-54_fam
InterPro:Tesmin/TSO1-like_CXC	ncoils:Coil	PANTHER:PTHR12446	PANTHER:PTHR12446:SF14	PFAM:PF03638	PFscan:PS51634
SEG:seg	SMART:SM01114	UniParc:UPI0002541CEA	UniProt:M4F642	MapMan:15.5.9	:

Description

AT5G25790 (E=7e-069) | transcription factor

Coordinates

chrA09:-:1728286..1730270

Molecular Weight (calculated)

50659.2 Da

IEP (calculated)

7.063

GRAVY (calculated)

-0.861

Length

456 amino acids

Sequence
(BLAST)

001: MDNSDQDLGS PRNQLARRLD FSVSAAAAEM ESSLLDSNYS REDHKEEDLL PPPPPSGSEE QVLKPPVRSE LTTPPQKPPP LNGFDHKSAK CRVSKQEPLT
101: PRGHTEAASN EGTPRKQKHC NCKNSKCLKL YCECFASGSY CNGCNCLNCH NNLENESARQ EAIKGTLERN PDAFKPKIAG SPLGTEDLQE DMRHQQLILG
201: KHSKGCHCKK SGCLKKYCEC FQANVLCSEN CRCQDCKNFE GSVERNTLLH GPETYIQQQT VHINPLESRK RKSKEASHSA RGSSAVPHLI RNGDTSLFSV
301: PNNREVSGST ACSYRSSLSN TIQPRHVKDL CALLVTKSLD VANKRRKSEK DPSLDPALRD ANETNDSPDC VLDSTRMDEK PLSPATRALM CDDEDVIISE
401: KETSAARVKT SQEKEEDADT SSESFVEQER QILSSFRDFL IQFSNRGNIK GKLIFA

Best Arabidopsis Sequence Match ( AT5G25790.2 )
(BLAST)

001: MEDLSNQNLL PRQSDISIPA EKMDSFQKSL EPPPCSPVKS SQQSETEVTP PQKPPLHQFG HNQVQKNRVS NQDPSTSRRH NEVESKENTP NKQQKHCNCK
101: NSKCLKLYCE CFASGSYCNG CNCVNCHNKL ENESSRQVAI SGILERNPDA FKPKIAGSPH GMKDLQENVQ QVLLIGKHSK GCHCRKSGCL KKYCECYQAN
201: ILCSENCRCQ DCKNFEGSEE RKALLHGSQV SDTYIQQMTN AAVNRAIDMS AYLYPPESRK RKSKDISDSV VSSYGVQYQR ANHVRRNGEN SLFSLPNNKA
301: VSGSTTSAYR SSWSNTFQPH HVRELCSLLV SNSVDVANKL SDKGRKNDKG PSSLDGAQRV ANEINDSPDC VLDANRMDEK PISPATRALM CDEEHEIGSE
401: KETSARVKTS QEKEDTDTSS GIYLEQERQI LSIFRDYLIQ LSNRARINGN LDIVSLFRYL QVEDCANLRH YFKQVKISKA TQIQVERNQK MKNKAIETQI
501: RDIA

Arabidopsis Description

Tesmin/TSO1-like CXC domain-containing protein [Source:TAIR;Acc:AT5G25790]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.