Factsheet for Bra023807.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033919.1-P	Field mustard	nucleus	73.8	18.45
Bra036900.1-P	Field mustard	nucleus, plastid	47.06	13.64
Bra023810.1-P	Field mustard	nucleus, plastid	40.64	12.84
Bra033920.1-P	Field mustard	plastid	38.5	12.52
Bra001884.1-P	Field mustard	nucleus, plastid	71.12	10.87
Bra025590.1-P	Field mustard	cytosol	7.49	9.86
Bra041042.1-P	Field mustard	nucleus	20.32	7.55
Bra009859.1-P	Field mustard	nucleus	19.25	7.07
Bra021165.1-P	Field mustard	nucleus	12.3	7.06
Bra036551.1-P	Field mustard	nucleus	15.51	6.36
Bra010348.1-P	Field mustard	nucleus	18.72	6.1
Bra011075.1-P	Field mustard	nucleus	16.04	5.68
Bra024171.1-P	Field mustard	nucleus	16.04	5.43
Bra001128.1-P	Field mustard	nucleus	11.23	4.03
Bra041164.1-P	Field mustard	nucleus	0.53	1.01

Protein Annotations

EnsemblPlants:Bra023807.1	EnsemblPlants:Bra023807.1-P	EnsemblPlantsGene:Bra023807	InterPro:Lin-54_fam	PANTHER:PTHR12446	PANTHER:PTHR12446:SF21
SEG:seg	UniParc:UPI0002544170	UniProt:M4E4V3	MapMan:35.1	:	:

Description

AT3G22780 (E=2e-064) TSO1, ATTSO1 | TSO1 (CHINESE FOR 'UGLY'); transcription factor

Coordinates

chrA01:-:20119282..20120248

Molecular Weight (calculated)

20882.6 Da

IEP (calculated)

7.993

GRAVY (calculated)

-0.738

Length

187 amino acids

Sequence
(BLAST)

001: METSSGVGCS INCRCEGCKN AFGRKDAYLH AIMESKLEED HETYEKRTAN IQEIEQNPSS DQPPAPQPLH RHLVVHQPFF SKNRLPPTLY FLGTDSFSFR
101: KPDGDSTQSR NEKKPVETVT EEKTEILPEI LSNTPITTIK AISPNSQRVS PPQLGSSESG SILVKRSNGR KLILRSIPAF PALNQHQ

Best Arabidopsis Sequence Match ( AT3G22780.1 )
(BLAST)

001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ

Arabidopsis Description

TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.