Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35239 | Canola | nucleus | 97.73 | 88.51 |
| Bra025590.1-P | Field mustard | cytosol | 21.4 | 79.58 |
| Bra010348.1-P | Field mustard | nucleus | 77.27 | 71.08 |
| AT4G29000.1 | Thale cress | nucleus | 80.3 | 70.32 |
| Bra024171.1-P | Field mustard | nucleus | 69.89 | 66.85 |
| Bra041042.1-P | Field mustard | nucleus | 56.25 | 59.05 |
| Bra041164.1-P | Field mustard | nucleus | 10.61 | 56.57 |
| VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 50.0 | 50.38 |
| KRH39300 | Soybean | nucleus | 52.46 | 49.55 |
| KRH48373 | Soybean | nucleus | 50.95 | 47.86 |
| KRH60264 | Soybean | nucleus | 50.38 | 47.42 |
| PGSC0003DMT400000824 | Potato | plastid | 43.75 | 47.34 |
| KRH41552 | Soybean | nucleus | 49.24 | 47.19 |
| Solyc12g007180.1.1 | Tomato | nucleus | 42.99 | 45.58 |
| Bra009859.1-P | Field mustard | nucleus | 34.09 | 35.36 |
| Bra036551.1-P | Field mustard | nucleus | 29.55 | 34.21 |
| Bra021165.1-P | Field mustard | nucleus | 16.67 | 26.99 |
| Bra023807.1-P | Field mustard | nucleus | 5.68 | 16.04 |
| Bra023810.1-P | Field mustard | nucleus, plastid | 17.42 | 15.54 |
| Bra033920.1-P | Field mustard | plastid | 15.91 | 14.61 |
| Bra036900.1-P | Field mustard | nucleus, plastid | 17.8 | 14.57 |
| Bra001128.1-P | Field mustard | nucleus | 14.02 | 14.2 |
| Bra033919.1-P | Field mustard | nucleus | 17.42 | 12.3 |
| Bra001884.1-P | Field mustard | nucleus, plastid | 18.18 | 7.85 |
Protein Annotations
| EnsemblPlants:Bra011075.1 | EnsemblPlants:Bra011075.1-P | EnsemblPlantsGene:Bra011075 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam |
| InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg |
| SMART:SM01114 | UniParc:UPI00025458D7 | UniProt:M4D3M1 | MapMan:15.5.9 | : | : |
Description
AT4G29000 (E=1e-125) | tesmin/TSO1-like CXC domain-containing protein
Coordinates
chrA01:-:4078631..4081317
Molecular Weight (calculated)
56585.2 Da
IEP (calculated)
8.210
GRAVY (calculated)
-0.729
Length
528 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEGGGGGGE FPPKKEGVTD ESGFPAKTPA RQLDFTGGSA EHSLSKPAPP TVVATVVKTI ATPSVSSSPI TTTMASRLHP VVRPTVPVVA TNSPSQSQIV
101: NAPIRHPKPE SPISRARPIV EGRDGTPQKK KQCNCKHSRC LKLYCECFAS GTYCDGCNCV NCFNNVDNEP ARRDAVEATL ERNPNAFRPK IASSPHGVRD
201: KREEIGEVVL LGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCRCLDCKN FDGSEERQAL FHGEHANNMA YLQQAANAAI TGAVGSSGFA PSPAPKRRKG
301: HDISFNQATK DSSTHRLGQF QQGNNGRTSG PTSDKRNETE TCLASSAQDN SQGNKDVEMV AADANQADKS GPEGSNSDAS KGNPLSPATL ALMCDEQDTI
401: FMVAAAEPNG SVDPGGCGKN SQEQSEIYAE KERVVLTKFR DCLSRLISYA EIKESKCSYL ARRHIQPPPT ASATVKTENG IQQIPEPRTT AQPTLTKPQP
501: LQPTTTTNTS TTQHPHKPQA LPEKKDST
101: NAPIRHPKPE SPISRARPIV EGRDGTPQKK KQCNCKHSRC LKLYCECFAS GTYCDGCNCV NCFNNVDNEP ARRDAVEATL ERNPNAFRPK IASSPHGVRD
201: KREEIGEVVL LGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCRCLDCKN FDGSEERQAL FHGEHANNMA YLQQAANAAI TGAVGSSGFA PSPAPKRRKG
301: HDISFNQATK DSSTHRLGQF QQGNNGRTSG PTSDKRNETE TCLASSAQDN SQGNKDVEMV AADANQADKS GPEGSNSDAS KGNPLSPATL ALMCDEQDTI
401: FMVAAAEPNG SVDPGGCGKN SQEQSEIYAE KERVVLTKFR DCLSRLISYA EIKESKCSYL ARRHIQPPPT ASATVKTENG IQQIPEPRTT AQPTLTKPQP
501: LQPTTTTNTS TTQHPHKPQA LPEKKDST
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.