CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60264	Soybean	nucleus	92.56	90.91
KRH39300	Soybean	nucleus	80.04	78.89
KRH48373	Soybean	nucleus	78.77	77.22
VIT_11s0016g03680.t01	Wine grape	nucleus, plastid	62.25	65.46
PGSC0003DMT400000824	Potato	plastid	54.99	62.09
Solyc12g007180.1.1	Tomato	nucleus	54.99	60.84
CDY71540	Canola	nucleus, plastid	29.22	60.75
CDY67603	Canola	cytosol	31.03	59.58
CDY05722	Canola	nucleus	50.27	55.96
Bra041042.1-P	Field mustard	nucleus	50.45	55.27
CDY31991	Canola	nucleus	50.45	54.94
GSMUA_Achr9P06330_001	Banana	cytosol	47.01	51.19
CDY35239	Canola	nucleus	53.36	50.43
AT4G29000.1	Thale cress	nucleus	55.17	50.41
CDX97461	Canola	nucleus	51.0	49.65
Bra011075.1-P	Field mustard	nucleus	47.19	49.24
GSMUA_Achr6P26760_001	Banana	nucleus	49.55	49.01
GSMUA_Achr2P09150_001	Banana	cytosol	46.28	48.85
AT2G20110.2	Thale cress	nucleus	51.18	48.79
CDY66476	Canola	nucleus	50.09	48.17
Bra010348.1-P	Field mustard	nucleus	49.91	47.91
CDX92907	Canola	nucleus	48.46	47.85
Bra024171.1-P	Field mustard	nucleus	46.82	46.74
GSMUA_Achr3P31550_001	Banana	nucleus	46.28	43.59
Os01t0761100-01	Rice	cytosol, nucleus, plastid	48.28	42.97
KRH62039	Soybean	nucleus	44.83	42.22
TraesCS3A01G304800.1	Wheat	plastid	46.1	41.3
TraesCS3B01G331700.1	Wheat	plastid	46.1	41.3
TraesCS3D01G297000.1	Wheat	plastid	46.1	41.3
HORVU3Hr1G073470.1	Barley	cytosol, nucleus, plastid	45.73	41.18
KRH52709	Soybean	nucleus	43.56	41.17
KXG33424	Sorghum	nucleus	45.19	40.62
Zm00001d012688_P001	Maize	nucleus	44.46	39.9
Zm00001d043378_P001	Maize	nucleus	43.19	38.95
KRH00620	Soybean	cytosol	5.44	27.78
CDY06853	Canola	cytosol, nucleus, plastid	53.18	20.81
KRH77830	Soybean	nucleus	18.51	13.18
KRH27657	Soybean	nucleus	17.97	12.79
KRH35487	Soybean	nucleus	17.06	12.37
KRG91344	Soybean	nucleus	16.88	12.02
KRH39836	Soybean	nucleus, plastid	16.7	10.5
KRH05122	Soybean	nucleus, plastid	16.7	10.18

Protein Annotations

EMBL:ACUP02004772	EnsemblPlants:KRH41552	EnsemblPlantsGene:GLYMA_08G037400	EntrezGene:100777327	InterPro:CRC	InterPro:IPR005172
InterPro:Lin-54_fam	InterPro:Tesmin/TSO1-like_CXC	PANTHER:PTHR12446	PANTHER:PTHR12446:SF14	PFAM:PF03638	PFscan:PS51634
ProteinID:KRH41552	ProteinID:KRH41552.1	SEG:seg	SMART:SM01114	UniParc:UPI0002337DB5	UniProt:K7L4S4
MapMan:15.5.9	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:2950046..2956245

Molecular Weight (calculated)

59131.8 Da

IEP (calculated)

7.551

GRAVY (calculated)

-0.546

Length

551 amino acids

Sequence
(BLAST)

001: MGEGEAEGSD GAPKNVVAND VVANALLPFD VPAKKLARQL DFTGFGGMST TPQPQPPVVL PLRPSTSVRV GKPESPKSRP RPGFEIKEAT PKKQKQCNCK
101: HSKCLKLYCE CFASGIYCDG CNCVNCCNNV ENEAARREAV EATLERNPNA FRPKIASSPH RTRDIREDAG EILILGKHNK GCHCKKSGCL KKYCECFQAN
201: ILCSENCKCM DCKNFEGSEE RQALFHGDQN NNLVYIQQAA NAAITGAIGS SGYSSPPISK KRKGQELLFG PTVKDPSVGR QGQQANNVRV PAPSSSLSPI
301: PGARVGPATL GPSKLMYRSL LADIIQPQHL KELCSVLVLV SGQAAKTFTD QKNLMDKHAE DQTETSRASS TQEQLPSQKE ANVDKAMADD DCSSANQTDN
401: ISLDNSCSDG ADAPKGRPMS PGTLALMCDE QDTMFMTAAS PVGSRAHACN TSLQPPYGQV MTEVYAEQER IVLTKFRDFL NRVITMGEIN ETKCSSLARS
501: ELESQKGPNM NCSGNDSTET AHQQAATNNN INGVAKAAAG NSILFPGSGS S

Best Arabidopsis Sequence Match ( AT2G20110.1 )
(BLAST)

001: MGEGEEGDKF PPKTDEVTQE SMKSARQLDF TGGSSDVEHS HSNQASSMAA ASIPSPIVTV TRPIITSQAP PTVATPIPPP PQSQGIILHV PIRHPRPESP
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT ANGVSQTAKQ PSQLTTTTTT PNTSSQTHLH KTPALSEKKD L

Arabidopsis Description

Tesmin/TSO1-like CXC domain-containing protein [Source:TAIR;Acc:AT2G20110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.