Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G297000.1 | Wheat | plastid | 98.37 | 98.37 |
| TraesCS3B01G331700.1 | Wheat | plastid | 97.72 | 97.72 |
| HORVU3Hr1G073470.1 | Barley | cytosol, nucleus, plastid | 94.47 | 94.93 |
| Os01t0761100-01 | Rice | cytosol, nucleus, plastid | 75.94 | 75.44 |
| KXG33424 | Sorghum | nucleus | 73.33 | 73.57 |
| Zm00001d012688_P001 | Maize | nucleus | 71.87 | 71.99 |
| Zm00001d043378_P001 | Maize | nucleus | 68.78 | 69.23 |
| CDY44573 | Canola | cytosol | 13.66 | 59.15 |
| Bra025590.1-P | Field mustard | cytosol | 13.66 | 59.15 |
| GSMUA_Achr9P06330_001 | Banana | cytosol | 42.6 | 51.78 |
| GSMUA_Achr2P09150_001 | Banana | cytosol | 41.63 | 49.04 |
| PGSC0003DMT400000824 | Potato | plastid | 38.37 | 48.36 |
| GSMUA_Achr6P26760_001 | Banana | nucleus | 42.93 | 47.4 |
| Solyc12g007180.1.1 | Tomato | nucleus | 37.89 | 46.79 |
| KRH41552 | Soybean | nucleus | 41.3 | 46.1 |
| KRH39300 | Soybean | nucleus | 41.79 | 45.98 |
| KRH48373 | Soybean | nucleus | 41.79 | 45.73 |
| KRH60264 | Soybean | nucleus | 41.63 | 45.63 |
| VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 38.86 | 45.61 |
| GSMUA_Achr3P31550_001 | Banana | nucleus | 41.14 | 43.25 |
| AT4G29000.1 | Thale cress | nucleus | 39.19 | 39.97 |
| AT2G20110.2 | Thale cress | nucleus | 37.4 | 39.79 |
| TraesCS7A01G341100.2 | Wheat | nucleus, plastid | 29.59 | 37.45 |
| TraesCS2A01G122300.2 | Wheat | plastid | 30.89 | 32.31 |
| TraesCS3A01G219300.1 | Wheat | nucleus | 10.41 | 26.45 |
| TraesCS5A01G054200.1 | Wheat | nucleus, plastid | 11.22 | 19.33 |
| TraesCS1A01G327100.1 | Wheat | plastid | 11.06 | 18.28 |
| TraesCS5A01G053800.1 | Wheat | nucleus | 15.28 | 12.29 |
| TraesCS4A01G284600.2 | Wheat | nucleus | 15.28 | 11.23 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G304800.1 | EnsemblPlantsGene:TraesCS3A01G304800 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg | SMART:SM01114 |
| MapMan:15.5.9 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:540959694..540968417
Molecular Weight (calculated)
66729.0 Da
IEP (calculated)
9.030
GRAVY (calculated)
-0.585
Length
615 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGKEQAGAG AGGAGSGPPP RVPVPAVSTQ PPIKKLVRQL DFNYGNPAMA AAAAAASRTV QPRALQVGYP QPHQLRAALP IGVPHQLQPR GLPVMRPHQM
101: VHATLPRPAL PMAMPVPVPQ ARSALSQPVQ RPPVAVPLKP ESPKPRGRLY DGKDGTPTKK KCCNCRHSKC LKLYCECFAS GIYCDGCNCT NCFNNVENEV
201: ARREAIEATL ERNPDAFRPK IGSSPHTNRN NMEVAGDVPL IGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCKCMDCKN FDGSEDRKHL NLDHKNVIHM
301: QQAANAAVNG AIGATALSSP STSRKRKHID SSLDLSTKEH LAIRNGQLSQ VIYQKNAMAS DGSLPIGQSA HPHMMGPFKV TYRPLLADII QPGDVKELCK
401: LLVTVSGQAA KAYTGRKIQE EKVAEKEDGV GGSLALTNHD REGKNKDQNH RKISIDDHSS GGTDMGKASL DDSRPDCTDD QKSSRPMSPG TLALMCDEQD
501: AMFATSQNAV APPAIDVDQN RSELYAEQER CVLTEFRDCL RKLVQYGRMK EEKYSMAIRS EVTGHPGQVN GAPRIPYPKV DVPVVKTFPQ SSSKHLVAGN
601: PSIGHLDKRL KPENT
101: VHATLPRPAL PMAMPVPVPQ ARSALSQPVQ RPPVAVPLKP ESPKPRGRLY DGKDGTPTKK KCCNCRHSKC LKLYCECFAS GIYCDGCNCT NCFNNVENEV
201: ARREAIEATL ERNPDAFRPK IGSSPHTNRN NMEVAGDVPL IGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCKCMDCKN FDGSEDRKHL NLDHKNVIHM
301: QQAANAAVNG AIGATALSSP STSRKRKHID SSLDLSTKEH LAIRNGQLSQ VIYQKNAMAS DGSLPIGQSA HPHMMGPFKV TYRPLLADII QPGDVKELCK
401: LLVTVSGQAA KAYTGRKIQE EKVAEKEDGV GGSLALTNHD REGKNKDQNH RKISIDDHSS GGTDMGKASL DDSRPDCTDD QKSSRPMSPG TLALMCDEQD
501: AMFATSQNAV APPAIDVDQN RSELYAEQER CVLTEFRDCL RKLVQYGRMK EEKYSMAIRS EVTGHPGQVN GAPRIPYPKV DVPVVKTFPQ SSSKHLVAGN
601: PSIGHLDKRL KPENT
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.