Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G026100.1 | Wheat | nucleus | 91.76 | 97.59 |
| TraesCS4B01G028500.1 | Wheat | nucleus | 89.25 | 94.68 |
| HORVU4Hr1G004280.15 | Barley | nucleus, plastid | 86.86 | 78.76 |
| Os07t0176200-01 | Rice | nucleus | 69.89 | 74.81 |
| OQU88523 | Sorghum | nucleus | 66.07 | 71.26 |
| Zm00001d018930_P003 | Maize | nucleus | 61.17 | 61.99 |
| CDY34235 | Canola | endoplasmic reticulum, extracellular, vacuole | 15.17 | 44.41 |
| AT4G14770.1 | Thale cress | nucleus | 30.94 | 38.43 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 33.81 | 38.35 |
| Bra036900.1-P | Field mustard | nucleus, plastid | 29.27 | 37.98 |
| CDY29770 | Canola | nucleus, plastid | 29.27 | 37.87 |
| CDY42785 | Canola | nucleus, plastid | 29.51 | 37.6 |
| CDY67857 | Canola | nucleus, plastid | 27.0 | 37.42 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 35.96 | 37.39 |
| TraesCS5A01G053800.1 | Wheat | nucleus | 33.93 | 37.12 |
| CDY10668 | Canola | nucleus, plastid | 25.45 | 37.11 |
| AT3G22760.1 | Thale cress | nucleus | 26.88 | 36.95 |
| Bra023810.1-P | Field mustard | nucleus, plastid | 25.93 | 36.66 |
| CDY54822 | Canola | cytosol, plastid | 24.01 | 36.61 |
| CDY64240 | Canola | cytosol, plastid | 26.05 | 36.58 |
| Bra033920.1-P | Field mustard | plastid | 24.97 | 36.35 |
| VIT_05s0020g03880.t01 | Wine grape | nucleus | 32.14 | 35.26 |
| KRH27657 | Soybean | nucleus | 32.26 | 34.88 |
| KRH77830 | Soybean | nucleus | 32.02 | 34.63 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 34.05 | 34.38 |
| AT3G22780.1 | Thale cress | nucleus | 28.2 | 33.96 |
| CDY64242 | Canola | nucleus | 10.63 | 33.71 |
| CDY54821 | Canola | nucleus | 27.24 | 33.58 |
| KRG91344 | Soybean | nucleus | 30.82 | 33.33 |
| KRH35487 | Soybean | nucleus | 30.23 | 33.29 |
| VIT_14s0030g01800.t01 | Wine grape | nucleus | 30.59 | 31.76 |
| Solyc09g082500.2.1 | Tomato | nucleus | 30.94 | 31.24 |
| PGSC0003DMT400082098 | Potato | nucleus | 30.7 | 31.11 |
| Bra033919.1-P | Field mustard | nucleus | 27.12 | 30.35 |
| CDY10669 | Canola | nucleus | 27.12 | 30.35 |
| TraesCS1A01G327100.1 | Wheat | plastid | 13.26 | 29.84 |
| TraesCS5A01G054200.1 | Wheat | nucleus, plastid | 11.83 | 27.73 |
| TraesCS3A01G219300.1 | Wheat | nucleus | 7.89 | 27.27 |
| CDX92957 | Canola | nucleus, plastid | 27.84 | 19.16 |
| CDX94892 | Canola | nucleus, plastid | 28.2 | 19.02 |
| Bra001884.1-P | Field mustard | nucleus, plastid | 27.36 | 18.72 |
| TraesCS7A01G341100.2 | Wheat | nucleus, plastid | 10.16 | 17.49 |
| TraesCS2A01G122300.2 | Wheat | plastid | 11.35 | 16.16 |
| TraesCS3A01G304800.1 | Wheat | plastid | 11.23 | 15.28 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G284600.2 | EnsemblPlantsGene:TraesCS4A01G284600 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF43 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg | SMART:SM01114 |
| MapMan:15.5.9 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:590994120..590999248
Molecular Weight (calculated)
90609.5 Da
IEP (calculated)
7.608
GRAVY (calculated)
-0.568
Length
837 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTPDRAAAP AAARAEDSPL FSFIDSLSPI EPLKSAYSGN GLQAYHQSLN VTSVSSIFTS PHHNAHKESK LSKGSFADYT ENELCMEEGT DKNKSPTSST
101: AVRLFACTST ITRESHTMTT CSVNEGIVDP PKGPNDLPQP GRFDSGSPDH NTAPCHGVSV RSDLKQDKCP KLEAVQTTNN TVEKRKCLFS TDMQLQDGCQ
201: PAKENNEVMG CEWDDLVSVT SGELLAFDSS MDQHHTGVQL AVNNAESCGY LLSKLAGGAD ISDRTHPTTS SQAYYHEMVV GEDKTENGQL FPEDKKTILS
301: EEIQDNINEE NACIPLGCKV ETQQRGVRRR CLVFEAAGYS HRTVQKESAG DLSFSTCKGK SSAQNHRNPG KTPSPHVFRG IGLHLNALAL TSKDKMACQD
401: PLATALVPSL KTEQVVHGNL LSAGGNFFHS GSGSLDLQMD NDDCSVGGFL GNDHNSSQSS SPPKKRRKSD NGDDDSCKRC SCKKSKCLKL YCECFAAGVY
501: CSEPCSCQGC LNKPIHEEIV LSTRKQIEFR NPLAFAPKVI RMSEAGQETQ EDPKNTPASA RHKRGCNCKK SSCLKKYCEC YQGGVGCSNN CRCETCKNTF
601: GTRDVAVSAE NEEMKQEGEQ TESCEKEKEN DQQKANVHSE DHKLVELVVP ITPPLDVSSS LLKQPNFSNA KPPRPCKARS GSSSRSSKAS VTVQSRKISK
701: VGDSVFIEEM PDILREPSSP GIVKTCSPNG KRVSPPHNAL SISPNRKGGR KLILKSIPSF PSLVGDTNGG SAICSSDSTT ALALGQAYSL CRHHMSFCVF
801: YQLLQKLICT FVLGTRSIVK AGLGSRLSAT GVRLVVR
101: AVRLFACTST ITRESHTMTT CSVNEGIVDP PKGPNDLPQP GRFDSGSPDH NTAPCHGVSV RSDLKQDKCP KLEAVQTTNN TVEKRKCLFS TDMQLQDGCQ
201: PAKENNEVMG CEWDDLVSVT SGELLAFDSS MDQHHTGVQL AVNNAESCGY LLSKLAGGAD ISDRTHPTTS SQAYYHEMVV GEDKTENGQL FPEDKKTILS
301: EEIQDNINEE NACIPLGCKV ETQQRGVRRR CLVFEAAGYS HRTVQKESAG DLSFSTCKGK SSAQNHRNPG KTPSPHVFRG IGLHLNALAL TSKDKMACQD
401: PLATALVPSL KTEQVVHGNL LSAGGNFFHS GSGSLDLQMD NDDCSVGGFL GNDHNSSQSS SPPKKRRKSD NGDDDSCKRC SCKKSKCLKL YCECFAAGVY
501: CSEPCSCQGC LNKPIHEEIV LSTRKQIEFR NPLAFAPKVI RMSEAGQETQ EDPKNTPASA RHKRGCNCKK SSCLKKYCEC YQGGVGCSNN CRCETCKNTF
601: GTRDVAVSAE NEEMKQEGEQ TESCEKEKEN DQQKANVHSE DHKLVELVVP ITPPLDVSSS LLKQPNFSNA KPPRPCKARS GSSSRSSKAS VTVQSRKISK
701: VGDSVFIEEM PDILREPSSP GIVKTCSPNG KRVSPPHNAL SISPNRKGGR KLILKSIPSF PSLVGDTNGG SAICSSDSTT ALALGQAYSL CRHHMSFCVF
801: YQLLQKLICT FVLGTRSIVK AGLGSRLSAT GVRLVVR
001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
Arabidopsis Description
TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.