CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033919.1-P	Field mustard	nucleus	98.53	98.53
CDY54821	Canola	nucleus	85.03	93.67
CDY34235	Canola	endoplasmic reticulum, extracellular, vacuole	28.88	75.52
AT3G22780.1	Thale cress	nucleus	66.18	71.22
CDY64242	Canola	nucleus	21.52	60.98
Os03t0638300-01	Rice	cytosol	8.29	54.87
CDY29770	Canola	nucleus, plastid	45.19	52.24
CDY54822	Canola	cytosol, plastid	37.83	51.55
CDY42785	Canola	nucleus, plastid	45.19	51.45
CDY10668	Canola	nucleus, plastid	39.3	51.22
CDY67857	Canola	nucleus, plastid	40.64	50.33
CDY64240	Canola	cytosol, plastid	39.04	48.99
CDX94892	Canola	nucleus, plastid	66.58	40.13
CDX92957	Canola	nucleus, plastid	64.3	39.56
KRH77830	Soybean	nucleus	39.44	38.11
KRH27657	Soybean	nucleus	39.3	37.98
PGSC0003DMT400082098	Potato	nucleus	40.91	37.05
Solyc09g082500.2.1	Tomato	nucleus	41.04	37.03
KRH35487	Soybean	nucleus	36.5	35.92
KRG91344	Soybean	nucleus	37.17	35.92
VIT_14s0030g01800.t01	Wine grape	nucleus	37.83	35.11
GSMUA_Achr9P10600_001	Banana	nucleus	33.02	33.47
GSMUA_Achr8P20460_001	Banana	nucleus	35.7	33.17
CDX79489	Canola	cytosol	13.64	31.58
CDY44573	Canola	cytosol	5.88	30.99
GSMUA_Achr9P25670_001	Banana	nucleus	33.82	30.52
TraesCS4D01G026100.1	Wheat	nucleus	30.88	29.35
CDX74164	Canola	nucleus	20.45	29.31
Os07t0176200-01	Rice	nucleus	30.48	29.16
HORVU5Hr1G012950.1	Barley	nucleus	29.81	29.11
Os12t0605500-01	Rice	nucleus	29.55	29.08
TraesCS5B01G062400.1	Wheat	nucleus	29.68	29.02
TraesCS5A01G053800.1	Wheat	nucleus	29.55	28.89
TraesCS5D01G065300.1	Wheat	nucleus	29.55	28.89
OQU88523	Sorghum	nucleus	29.95	28.87
CDY40681	Canola	mitochondrion, plasma membrane, plastid, vacuole	20.86	28.73
TraesCS4B01G028500.1	Wheat	nucleus	30.21	28.64
CDY71540	Canola	nucleus, plastid	10.03	28.3
EES17353	Sorghum	nucleus	28.88	28.16
TraesCS4A01G284600.2	Wheat	nucleus	30.35	27.12
Zm00001d018930_P003	Maize	nucleus	29.68	26.88
CDY67603	Canola	cytosol	10.03	26.13
EER93767	Sorghum	nucleus	25.94	25.97
Zm00001d041445_P007	Maize	golgi, nucleus, plasma membrane	28.74	25.72
Zm00001d031009_P004	Maize	golgi, plasma membrane	28.48	25.6
HORVU4Hr1G004280.15	Barley	nucleus, plastid	30.61	24.81
Zm00001d033274_P005	Maize	nucleus	23.93	24.39
CDY20184	Canola	cytosol	9.49	20.88
CDY28377	Canola	nucleus	9.09	20.73
CDY19795	Canola	nucleus	12.57	20.66
CDY05722	Canola	nucleus	12.83	19.39
CDX80536	Canola	nucleus	13.37	19.27
CDX88196	Canola	nucleus	13.1	19.22
CDY31991	Canola	nucleus	12.97	19.17
CDY05340	Canola	nucleus	11.63	18.2
CDY65712	Canola	nucleus	10.96	17.9
CDY66476	Canola	nucleus	13.5	17.63
CDX97461	Canola	nucleus	13.24	17.49
CDX92907	Canola	nucleus	12.7	17.03
CDY35239	Canola	nucleus	12.97	16.64
CDY06853	Canola	cytosol, nucleus, plastid	12.97	6.89

Protein Annotations

EnsemblPlants:CDY10669	EnsemblPlantsGene:GSBRNA2T00048431001	InterPro:CRC	InterPro:IPR005172	InterPro:Lin-54_fam	InterPro:Tesmin/TSO1-like_CXC
PANTHER:PTHR12446	PANTHER:PTHR12446:SF21	PFAM:PF03638	PFscan:PS51634	ProteinID:CDY10669	ProteinID:CDY10669.1
SEG:seg	SMART:SM01114	UniParc:UPI0004EE045A	UniProt:A0A078FCI8	MapMan:15.5.9	:

Description

BnaA05g16930DBnaA05g16930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCI8]

Coordinates

chrLK032005:+:482288..486074

Molecular Weight (calculated)

82167.8 Da

IEP (calculated)

7.829

GRAVY (calculated)

-0.629

Length

748 amino acids

Sequence
(BLAST)

001: MDNSQKKKIE TPTPKSKFED SPVFNYINNL SPIEAVRSIP TVQTFNSLSF TSPPPVFTSP HASFHRESRF FRCHNSVERS KALESLDRSV STQEVVVASG
101: EVDLNKEATL EDQEDETSCD RVDSPGPGDI VTQVLLDPSG GAPQGEDDGS SSQDVSVGLR KILDAQKESG TPRLMADADE LLVFRSPNDS EAFGCLVDKI
201: SSSERRFCAG VKLTKHRDIT KDVPANDNQP LAVVPNQLVS NLHRGSMRRR CLDFEVLGKR KKDIADDDQL AVGDNKAESS SKCVVPGIGL HLNAIAMASR
301: GIKINTIHED SASVEIQKSF LGSATPVQSQ DIMRETLDQA ESEPGKGLAV EEETPKPLVF EELNQDSLQK KKQVRKVEEP GEGDSCKRCN CKKSKCLKLY
401: CECFAAGVYC IEPCSCVDCF NRPIHEDTVL ATRKQIESRN PLAFAPKVIR NSDSIMETSD DASKTPASAR HKRGCNCKKS NCLKKYCECF QSGVGCSINC
501: RCEGCKNAFG KKDAYLLAIM ESKQEEDLSK IQQNSDLSKE VEQNHPSSDQ PSTPLPPYRH MVVHQPFLSK NRLPPTQFFL GAGSSSFRKP DGDLAQARIE
601: KKPLETVTQD KTEIMPEILS NTPITTVKAI SPNSKRVSPP HIGSSESGSI LGKRTNGRKL ILRAQPLQNA QSSFAFPAAS SAPQQSVTSN QPAKHVKKAS
701: RGRPLKIRKI ENIPSGSGTF WSPFTDRSFE VFGSRVYDRS ATDSQPPQ

Best Arabidopsis Sequence Match ( AT3G22780.1 )
(BLAST)

001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ

Arabidopsis Description

TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.