Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG91344 | Soybean | nucleus | 90.79 | 89.15 |
| KRH77830 | Soybean | nucleus | 68.55 | 67.31 |
| KRH27657 | Soybean | nucleus | 66.84 | 65.63 |
| Os03t0638300-01 | Rice | cytosol | 8.03 | 53.98 |
| CDY34235 | Canola | endoplasmic reticulum, extracellular, vacuole | 18.68 | 49.65 |
| CDY29770 | Canola | nucleus, plastid | 40.39 | 47.45 |
| CDY54822 | Canola | cytosol, plastid | 34.08 | 47.18 |
| Bra036900.1-P | Field mustard | nucleus, plastid | 39.87 | 46.98 |
| CDY67857 | Canola | nucleus, plastid | 37.11 | 46.69 |
| CDY64240 | Canola | cytosol, plastid | 36.45 | 46.48 |
| AT4G14770.1 | Thale cress | nucleus | 41.05 | 46.29 |
| Bra023810.1-P | Field mustard | nucleus, plastid | 36.05 | 46.28 |
| CDY42785 | Canola | nucleus, plastid | 39.87 | 46.12 |
| CDY10668 | Canola | nucleus, plastid | 34.74 | 45.99 |
| Bra033920.1-P | Field mustard | plastid | 33.95 | 44.87 |
| AT3G22760.1 | Thale cress | nucleus | 35.13 | 43.84 |
| Solyc09g082500.2.1 | Tomato | nucleus | 47.76 | 43.79 |
| PGSC0003DMT400082098 | Potato | nucleus | 47.37 | 43.58 |
| KRH00620 | Soybean | cytosol | 6.18 | 43.52 |
| AT3G22780.1 | Thale cress | nucleus | 38.55 | 42.16 |
| VIT_14s0030g01800.t01 | Wine grape | nucleus | 44.21 | 41.69 |
| CDY54821 | Canola | nucleus | 36.71 | 41.09 |
| CDY64242 | Canola | nucleus | 13.29 | 38.26 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 36.58 | 37.67 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 39.47 | 37.27 |
| Bra033919.1-P | Field mustard | nucleus | 35.92 | 36.5 |
| CDY10669 | Canola | nucleus | 35.92 | 36.5 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 38.55 | 35.34 |
| TraesCS5A01G053800.1 | Wheat | nucleus | 34.74 | 34.51 |
| HORVU5Hr1G012950.1 | Barley | nucleus | 34.61 | 34.33 |
| TraesCS5D01G065300.1 | Wheat | nucleus | 34.47 | 34.25 |
| TraesCS5B01G062400.1 | Wheat | nucleus | 34.34 | 34.12 |
| Os07t0176200-01 | Rice | nucleus | 34.61 | 33.63 |
| OQU88523 | Sorghum | nucleus | 33.95 | 33.25 |
| EES17353 | Sorghum | nucleus | 33.03 | 32.72 |
| Os12t0605500-01 | Rice | nucleus | 32.5 | 32.5 |
| TraesCS4D01G026100.1 | Wheat | nucleus | 32.76 | 31.64 |
| TraesCS4B01G028500.1 | Wheat | nucleus | 31.97 | 30.8 |
| TraesCS4A01G284600.2 | Wheat | nucleus | 33.29 | 30.23 |
| Zm00001d018930_P003 | Maize | nucleus | 32.76 | 30.15 |
| Zm00001d041445_P007 | Maize | golgi, nucleus, plasma membrane | 33.03 | 30.02 |
| Zm00001d031009_P004 | Maize | golgi, plasma membrane | 32.11 | 29.33 |
| EER93767 | Sorghum | nucleus | 28.55 | 29.05 |
| Zm00001d033274_P005 | Maize | nucleus | 26.97 | 27.93 |
| HORVU4Hr1G004280.15 | Barley | nucleus, plastid | 32.76 | 26.98 |
| KRH05122 | Soybean | nucleus, plastid | 29.21 | 24.56 |
| KRH39836 | Soybean | nucleus, plastid | 27.76 | 24.09 |
| Bra001884.1-P | Field mustard | nucleus, plastid | 37.89 | 23.55 |
| CDX92957 | Canola | nucleus, plastid | 36.45 | 22.78 |
| CDX94892 | Canola | nucleus, plastid | 35.92 | 22.0 |
| KRH48373 | Soybean | nucleus | 13.16 | 17.79 |
| KRH39300 | Soybean | nucleus | 13.03 | 17.71 |
| KRH41552 | Soybean | nucleus | 12.37 | 17.06 |
| KRH60264 | Soybean | nucleus | 12.24 | 16.58 |
| KRH62039 | Soybean | nucleus | 12.37 | 16.07 |
| KRH52709 | Soybean | nucleus | 12.24 | 15.95 |
Protein Annotations
| EMBL:ACUP02006680 | EnsemblPlants:KRH35487 | EnsemblPlantsGene:GLYMA_10G245500 | EntrezGene:100820491 | InterPro:CRC | InterPro:IPR005172 |
| InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF21 | PFAM:PF03638 | PFscan:PS51634 |
| ProteinID:KRH35487 | ProteinID:KRH35487.1 | SEG:seg | SMART:SM01114 | UniParc:UPI000233CAB7 | UniProt:K7LL80 |
| MapMan:15.5.9 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:47393249..47399064
Molecular Weight (calculated)
82349.5 Da
IEP (calculated)
6.156
GRAVY (calculated)
-0.587
Length
760 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTPDRSKIN TPLSQFEDSP VFNYISNLSP IEPVKSVHLT HTFNSYSFSS PPSVFTSPHG NCHKESRFLK RHNLLETSKP KVWSEDVNSV YSSEETLADS
101: TQACHESSEQ QENTAQKISI GDASIEPCNE NPNISIELPQ VLKCNLGSPG YEPLLCCDEA NSLLELPGNG KPASDVAYVP EGSEKDSIEG EMHLLGLCQI
201: EEAKVEGPNC GVDSLITEVS DLLMLSPPNV TEAFKGLNKQ LNPSIELGNF MTLIPQSATN DGQQMHIGNA VASGSEHEIE DHPSESAAAT GTGQRQDNLA
301: NVALVASHPS ENMDNKLVYA RHRGIRRRCL DFEMAIVQWK NPADNSNTNS STAISDEGNV GNEKQLLPTK HSGDSRRCVL PGIGLHLNAL ASLKDCKNVK
401: IENLSSGRQP NLHCSPSSVQ LSASQELQLS LVPASSEIDL VPSENEVQPG EDFQQNSPKK KRCKLEPAGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE
501: PCACHDCFNK PIHVETVLQT RQQIESRNPL AFAPKVIRSS DSVSEIGDDP NKTPASARHK RGCNCKKSSC LKKYCECYQG GVGCSISCRC EGCKNTYGRK
601: DGSVPSGLEA EPEEETEACE KGVVENASLK TETKNTEDHP DQSLATTPLP LSRSLLPLSF SSKCKPPRSS VITISSSGLL VGQKLGKSNA PWSQSQPKCE
701: KPLETVPDDD SSVTCIKTSS PNGKRISSPN CKVGSSPTRR GGRKLILQSI SSFPSLTPHH
101: TQACHESSEQ QENTAQKISI GDASIEPCNE NPNISIELPQ VLKCNLGSPG YEPLLCCDEA NSLLELPGNG KPASDVAYVP EGSEKDSIEG EMHLLGLCQI
201: EEAKVEGPNC GVDSLITEVS DLLMLSPPNV TEAFKGLNKQ LNPSIELGNF MTLIPQSATN DGQQMHIGNA VASGSEHEIE DHPSESAAAT GTGQRQDNLA
301: NVALVASHPS ENMDNKLVYA RHRGIRRRCL DFEMAIVQWK NPADNSNTNS STAISDEGNV GNEKQLLPTK HSGDSRRCVL PGIGLHLNAL ASLKDCKNVK
401: IENLSSGRQP NLHCSPSSVQ LSASQELQLS LVPASSEIDL VPSENEVQPG EDFQQNSPKK KRCKLEPAGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE
501: PCACHDCFNK PIHVETVLQT RQQIESRNPL AFAPKVIRSS DSVSEIGDDP NKTPASARHK RGCNCKKSSC LKKYCECYQG GVGCSISCRC EGCKNTYGRK
601: DGSVPSGLEA EPEEETEACE KGVVENASLK TETKNTEDHP DQSLATTPLP LSRSLLPLSF SSKCKPPRSS VITISSSGLL VGQKLGKSNA PWSQSQPKCE
701: KPLETVPDDD SSVTCIKTSS PNGKRISSPN CKVGSSPTRR GGRKLILQSI SSFPSLTPHH
001: MDTPQKSITQ IGTPISKSRF EDSPVFNYIN SLSPIRPVRS IPNPNQFSSL NFTSPPSVFT SPHLTSSHKE SRFFKTHNSS SSDPTNSVES QEDESTSHEE
101: VPAEGEDTKG LNIDDCMREE ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE
201: AFRCFMMQRA SNSEARFRNG VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD
301: CKTNVTQDYS CSANIQVGLQ RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE
401: PCSCIDCFNK PIHEDVVLAT RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK
501: DGSSIDMEAE QEEENETSEK SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE
601: KSFETVAVDG AEQMPEILIH SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
101: VPAEGEDTKG LNIDDCMREE ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE
201: AFRCFMMQRA SNSEARFRNG VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD
301: CKTNVTQDYS CSANIQVGLQ RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE
401: PCSCIDCFNK PIHEDVVLAT RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK
501: DGSSIDMEAE QEEENETSEK SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE
601: KSFETVAVDG AEQMPEILIH SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
Arabidopsis Description
TCX2Protein tesmin/TSO1-like CXC 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JIF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.