Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52709 | Soybean | nucleus | 88.55 | 88.85 |
| KRH41552 | Soybean | nucleus | 42.22 | 44.83 |
| KRH60264 | Soybean | nucleus | 42.73 | 44.56 |
| KRH39300 | Soybean | nucleus | 42.56 | 44.54 |
| KRH48373 | Soybean | nucleus | 42.73 | 44.48 |
| Solyc07g020710.2.1 | Tomato | nucleus | 38.12 | 39.12 |
| VIT_04s0008g03670.t01 | Wine grape | plastid | 44.62 | 38.61 |
| KRH00620 | Soybean | cytosol | 4.96 | 26.85 |
| KRH77830 | Soybean | nucleus | 17.27 | 13.05 |
| KRH27657 | Soybean | nucleus | 16.75 | 12.66 |
| KRH35487 | Soybean | nucleus | 16.07 | 12.37 |
| KRG91344 | Soybean | nucleus | 15.9 | 12.02 |
| KRH39836 | Soybean | nucleus, plastid | 17.27 | 11.53 |
| KRH05122 | Soybean | nucleus, plastid | 16.92 | 10.95 |
Protein Annotations
| EMBL:ACUP02002211 | EnsemblPlants:KRH62039 | EnsemblPlantsGene:GLYMA_04G081700 | EntrezGene:100811459 | InterPro:CRC | InterPro:IPR005172 |
| InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 |
| ProteinID:KRH62039 | ProteinID:KRH62039.1 | SEG:seg | SMART:SM01114 | UniParc:UPI0002957523 | UniProt:K7KIV6 |
| MapMan:15.5.9 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:6866100..6874037
Molecular Weight (calculated)
64546.4 Da
IEP (calculated)
8.159
GRAVY (calculated)
-0.632
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQSETASDL APRKLARQLD FAAVYGDPSH QKLPPPLPPP QSPLRPPSHS PLRLQLDLQP PGQRPWLYSE AQEQQPGLYS PRPKLVSPVR RIPHPVVKFP
101: VKVLQVVKPE SPRSQPRCNV ELKDTTPKKQ KQCNCKNSRC LKLYCECFAA GIYCDGCNCV NCHNNVDNEA ARQEAVGITL ERNPNAFRPK IASSPQEQRD
201: SKECEIKVIG KHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCMDCKNFE GSDERIAIFH KDYNLVHMKQ AANATISGAV GSSGYGTHIT PKKRKNQEMF
301: PGKSAMDQTV NMTAQYLQEI DPMASSPSSL SDSFISDPSN TRISGSSRST YRSVLADVLK PNNVKNLCSL FVVLSRVAAK TNAEMRGKVD QQTKTGNFEA
401: SVASSAKSLQ ETRDVHQPAC DDHVNKDEAE AVDVAHYNRP LSPETLALMC DEQDDMLFGN CSADGVACNS TFQNMIQKSF NSDGCTDVYR EQERLILTKF
501: LDILRGLVTH GSIKETMCSS LTKKGERSKK EPADNGNNGA ETNVGSEKGI QSNCFANYLI PSIAKISQTN YAITNGHGNN DLSLT
101: VKVLQVVKPE SPRSQPRCNV ELKDTTPKKQ KQCNCKNSRC LKLYCECFAA GIYCDGCNCV NCHNNVDNEA ARQEAVGITL ERNPNAFRPK IASSPQEQRD
201: SKECEIKVIG KHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCMDCKNFE GSDERIAIFH KDYNLVHMKQ AANATISGAV GSSGYGTHIT PKKRKNQEMF
301: PGKSAMDQTV NMTAQYLQEI DPMASSPSSL SDSFISDPSN TRISGSSRST YRSVLADVLK PNNVKNLCSL FVVLSRVAAK TNAEMRGKVD QQTKTGNFEA
401: SVASSAKSLQ ETRDVHQPAC DDHVNKDEAE AVDVAHYNRP LSPETLALMC DEQDDMLFGN CSADGVACNS TFQNMIQKSF NSDGCTDVYR EQERLILTKF
501: LDILRGLVTH GSIKETMCSS LTKKGERSKK EPADNGNNGA ETNVGSEKGI QSNCFANYLI PSIAKISQTN YAITNGHGNN DLSLT
001: MGEGEEGDKF PPKTDEVTQE SMKSARQLDF TGGSSDVEHS HSNQASSMAA ASIPSPIVTV TRPIITSQAP PTVATPIPPP PQSQGIILHV PIRHPRPESP
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT ANGVSQTAKQ PSQLTTTTTT PNTSSQTHLH KTPALSEKKD L
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT ANGVSQTAKQ PSQLTTTTTT PNTSSQTHLH KTPALSEKKD L
Arabidopsis Description
Tesmin/TSO1-like CXC domain-containing protein [Source:TAIR;Acc:AT2G20110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.