Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62039 | Soybean | nucleus | 88.85 | 88.55 |
| KRH41552 | Soybean | nucleus | 41.17 | 43.56 |
| KRH48373 | Soybean | nucleus | 41.68 | 43.24 |
| KRH60264 | Soybean | nucleus | 41.51 | 43.14 |
| KRH39300 | Soybean | nucleus | 41.34 | 43.11 |
| Solyc07g020710.2.1 | Tomato | nucleus | 37.74 | 38.6 |
| VIT_04s0008g03670.t01 | Wine grape | plastid | 43.74 | 37.72 |
| KRH00620 | Soybean | cytosol | 4.8 | 25.93 |
| KRH77830 | Soybean | nucleus | 16.98 | 12.79 |
| KRH27657 | Soybean | nucleus | 16.47 | 12.4 |
| KRH35487 | Soybean | nucleus | 15.95 | 12.24 |
| KRG91344 | Soybean | nucleus | 15.61 | 11.76 |
| KRH39836 | Soybean | nucleus, plastid | 16.81 | 11.19 |
| KRH05122 | Soybean | nucleus, plastid | 16.3 | 10.51 |
Protein Annotations
| EMBL:ACUP02003427 | EnsemblPlants:KRH52709 | EnsemblPlantsGene:GLYMA_06G083400 | EntrezGene:100812944 | InterPro:CRC | InterPro:IPR005172 |
| InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 |
| ProteinID:KRH52709 | ProteinID:KRH52709.1 | SEG:seg | SMART:SM01114 | UniParc:UPI0002960BB4 | UniProt:K7KTW2 |
| MapMan:15.5.9 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:6399093..6404808
Molecular Weight (calculated)
64389.3 Da
IEP (calculated)
8.285
GRAVY (calculated)
-0.609
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQSETASDL APRKLVRQLN FAAVYGDPSH LKLPPPSPSP SPPPPSHSPL RLQLDLLPPG QRPWLCSEPQ EQQAWLYSPR LKLVSPVRRI PHPVKKLPVK
101: VLQVAKPKSP RSQPQCNVEL KDTTPKKQKQ CNCKNSRCLK LYCECFAAGI YCDGCNCVNC HNNVDNEAAR QEAVGITLER NPNAFRPKIA SSPLERRDSK
201: ECEIQVIGKH NKGCHCKKSG CLKKYCECFQ ANILCSENCK CMDCKNFEGS DERRAIFHKD YNLVHIKQAA NATISRVAGS SGYGTHLTPK KRKIHEMFPG
301: KSAMDQTDNI TAQYQQEIDP MASSPSFLSD SFVSDPSNTR ISASSRSTYR SVLADFFQPQ NVKNLCSLFV VLSQVAAKTN AEMIGKVDQQ TKTGNFEASV
401: ASSSKSLQET RDVHQLVCDD HVNKDEADAV DIANYNRPLS PETLALMCDE QDDMIFGNSS ANGVACNSTL QNMIQKSSNS DGCTDVCREQ ERLILTKFLD
501: VLRGLVTHGS IKETMCSSST KKGERSKKEP ADNANIGAET NVGREKGIHN NSFGNYLIPS VTKISQTNYA VTNGHGNNDL SLT
101: VLQVAKPKSP RSQPQCNVEL KDTTPKKQKQ CNCKNSRCLK LYCECFAAGI YCDGCNCVNC HNNVDNEAAR QEAVGITLER NPNAFRPKIA SSPLERRDSK
201: ECEIQVIGKH NKGCHCKKSG CLKKYCECFQ ANILCSENCK CMDCKNFEGS DERRAIFHKD YNLVHIKQAA NATISRVAGS SGYGTHLTPK KRKIHEMFPG
301: KSAMDQTDNI TAQYQQEIDP MASSPSFLSD SFVSDPSNTR ISASSRSTYR SVLADFFQPQ NVKNLCSLFV VLSQVAAKTN AEMIGKVDQQ TKTGNFEASV
401: ASSSKSLQET RDVHQLVCDD HVNKDEADAV DIANYNRPLS PETLALMCDE QDDMIFGNSS ANGVACNSTL QNMIQKSSNS DGCTDVCREQ ERLILTKFLD
501: VLRGLVTHGS IKETMCSSST KKGERSKKEP ADNANIGAET NVGREKGIHN NSFGNYLIPS VTKISQTNYA VTNGHGNNDL SLT
001: MGEGEEGDKF PPKTDEVTQE SMKSARQLDF TGGSSDVEHS HSNQASSMAA ASIPSPIVTV TRPIITSQAP PTVATPIPPP PQSQGIILHV PIRHPRPESP
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT ANGVSQTAKQ PSQLTTTTTT PNTSSQTHLH KTPALSEKKD L
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT ANGVSQTAKQ PSQLTTTTTT PNTSSQTHLH KTPALSEKKD L
Arabidopsis Description
Tesmin/TSO1-like CXC domain-containing protein [Source:TAIR;Acc:AT2G20110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.