Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH05122 | Soybean | nucleus, plastid | 85.73 | 83.08 |
| KRH00620 | Soybean | cytosol | 10.05 | 81.48 |
| VIT_04s0008g05130.t01 | Wine grape | extracellular, golgi | 19.86 | 39.82 |
| GSMUA_Achr2P17070_001 | Banana | nucleus | 21.46 | 30.18 |
| KRH77830 | Soybean | nucleus | 25.34 | 28.68 |
| KRH27657 | Soybean | nucleus | 25.23 | 28.55 |
| KRH35487 | Soybean | nucleus | 24.09 | 27.76 |
| KRG91344 | Soybean | nucleus | 24.32 | 27.52 |
| PGSC0003DMT400059571 | Potato | nucleus, plastid | 26.48 | 26.04 |
| Solyc08g067150.2.1 | Tomato | nucleus | 28.88 | 25.61 |
| KRH62039 | Soybean | nucleus | 11.53 | 17.27 |
| KRH39300 | Soybean | nucleus | 10.84 | 16.99 |
| KRH52709 | Soybean | nucleus | 11.19 | 16.81 |
| KRH41552 | Soybean | nucleus | 10.5 | 16.7 |
| KRH60264 | Soybean | nucleus | 10.62 | 16.58 |
| KRH48373 | Soybean | nucleus | 10.39 | 16.19 |
Protein Annotations
| EMBL:ACUP02006007 | EnsemblPlants:KRH39836 | EnsemblPlantsGene:GLYMA_09G223500 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam |
| InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF34 | PFAM:PF03638 | PFscan:PS51634 | ProteinID:KRH39836 |
| ProteinID:KRH39836.1 | SEG:seg | SMART:SM01114 | UniParc:UPI00029530BE | UniProt:I1M9K0 | MapMan:15.5.9 |
Description
hypothetical protein
Coordinates
chr9:-:44817517..44823266
Molecular Weight (calculated)
95784.1 Da
IEP (calculated)
5.328
GRAVY (calculated)
-0.686
Length
876 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDSPGPSKN NNGSSSSAST LNNNNNDAAS SESPQVQESP FLRFVKTLSP IPTKASHTTQ GCLRLSSPPL VFKSPRISHR ETQLTERPQG TRSLGGVILQ
101: SVNEGNMLGE APGDSRTSNS QQSLPERFIN DTQQVFDSKN DENTQYYSSP SCIDKYLVDP GDIDQMYSAG QDVEQQSTDP AEASLSDQIH PKNNILNFDR
201: QDGPGDKVEE SLPLSEGFNK FHQENAAYGE EPEEMEVENN DVQWSSQEPA KLESILAADV FEKRYSHDTL PQGVKGCEDY NEMVPTSHVT AENILQDGSK
301: ATLKYHGIRR RCLQFGEAAS NALGSNVKLN ATSNKIIMVK PSELVTSLCP QRGSGNFPLT GPKPTGIGLH INRIMNAIPT GQAATMGVRL SDGSQGMKST
401: SSIRLQRIEN VKRSILSSNV DGRSLVNTRT ESHEIDDTGN SEDFNIPSSP CQKKKKISET ADDDGCKHCN CKKSRCLKLY CHCFAAGTYC TDPCACQGCL
501: NRPEYAETVV ETKQLIESRD PSAFDPKIVL PTTDISSHMD DENLTTPSSA RHKRGCNCKR SMCLKKYCEC YQANVGCSSG CRCEGCKNVY GKKEDYVAFE
601: HTSSKERESS IVEEGSDYTF HKKLERVASK TVYGLHCLSP ITPSLQCSEQ GKEAAKSIII SGNYLPSPES DVNMFASCAN YTKSSENLHS SQALLGTNEM
701: LGSTPYDSQI ECSHAALLQL TPPLSNPELC GTSSFSSIAN EWRNISQSQP THGCISQLPS GSLCWRSSPL TPSNRVGEAQ YFQCSESDSR LFDILENETP
801: DVLKEASTPM TSVKINSPTQ KRVSPPQSRH FEIGSSSSGG LRSDRKFIFE SVPSFPSLSP CVNSKSNGDD DEEDIS
101: SVNEGNMLGE APGDSRTSNS QQSLPERFIN DTQQVFDSKN DENTQYYSSP SCIDKYLVDP GDIDQMYSAG QDVEQQSTDP AEASLSDQIH PKNNILNFDR
201: QDGPGDKVEE SLPLSEGFNK FHQENAAYGE EPEEMEVENN DVQWSSQEPA KLESILAADV FEKRYSHDTL PQGVKGCEDY NEMVPTSHVT AENILQDGSK
301: ATLKYHGIRR RCLQFGEAAS NALGSNVKLN ATSNKIIMVK PSELVTSLCP QRGSGNFPLT GPKPTGIGLH INRIMNAIPT GQAATMGVRL SDGSQGMKST
401: SSIRLQRIEN VKRSILSSNV DGRSLVNTRT ESHEIDDTGN SEDFNIPSSP CQKKKKISET ADDDGCKHCN CKKSRCLKLY CHCFAAGTYC TDPCACQGCL
501: NRPEYAETVV ETKQLIESRD PSAFDPKIVL PTTDISSHMD DENLTTPSSA RHKRGCNCKR SMCLKKYCEC YQANVGCSSG CRCEGCKNVY GKKEDYVAFE
601: HTSSKERESS IVEEGSDYTF HKKLERVASK TVYGLHCLSP ITPSLQCSEQ GKEAAKSIII SGNYLPSPES DVNMFASCAN YTKSSENLHS SQALLGTNEM
701: LGSTPYDSQI ECSHAALLQL TPPLSNPELC GTSSFSSIAN EWRNISQSQP THGCISQLPS GSLCWRSSPL TPSNRVGEAQ YFQCSESDSR LFDILENETP
801: DVLKEASTPM TSVKINSPTQ KRVSPPQSRH FEIGSSSSGG LRSDRKFIFE SVPSFPSLSP CVNSKSNGDD DEEDIS
001: MMDNVKKKSD TPDWETLIAA TTELIYGSPR ESEAFSCLLK KTSNSEARLR GSITATSVAV TNTDVVNNES ESVDALSILH RGVRRRCLDF EVKGNNQQTL
101: GESSSSCVVP SIGLHLNTIA MSSKDKNVAN EYSFSGNIKV GVQSSLTPVL HSQHDIVREN ESGKDSGQII EVVPKSLASV DLTPISPKKK RRKSEQSGEG
201: DSSCKRCNCK KSKCLKLYCE CFAAGFYCIE PCSCINCFNK PIHKDVVLAT RKQIESRNPL AFAPKVIRNS DSIIEVGEDA SKTPASARHK RGCNCKKSNC
301: LKKYCECYQG GVGCSINCRC EGCKNAFGRK DGSLFEQDEE NETSGTPGTK KTQQNVELFK PAAPPSTPIP FRQPLAQLPI SSNNRLLPPQ SHFHHGAIGS
401: SSSGIYNIRK PDMSLLSHSR IETITEDIDD MSENLIHSPI TTLSPNSKRV SLSHLDSPES TPWRRNGGGR NLIRSFPTFP SLTPHH
101: GESSSSCVVP SIGLHLNTIA MSSKDKNVAN EYSFSGNIKV GVQSSLTPVL HSQHDIVREN ESGKDSGQII EVVPKSLASV DLTPISPKKK RRKSEQSGEG
201: DSSCKRCNCK KSKCLKLYCE CFAAGFYCIE PCSCINCFNK PIHKDVVLAT RKQIESRNPL AFAPKVIRNS DSIIEVGEDA SKTPASARHK RGCNCKKSNC
301: LKKYCECYQG GVGCSINCRC EGCKNAFGRK DGSLFEQDEE NETSGTPGTK KTQQNVELFK PAAPPSTPIP FRQPLAQLPI SSNNRLLPPQ SHFHHGAIGS
401: SSSGIYNIRK PDMSLLSHSR IETITEDIDD MSENLIHSPI TTLSPNSKRV SLSHLDSPES TPWRRNGGGR NLIRSFPTFP SLTPHH
Arabidopsis Description
TCX3Protein tesmin/TSO1-like CXC 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L548]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.