Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH00620 | Soybean | cytosol | 7.54 | 43.52 |
| VIT_04s0008g05130.t01 | Wine grape | extracellular, golgi | 25.36 | 36.16 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 28.09 | 23.71 |
| KRH05122 | Soybean | nucleus, plastid | 32.1 | 22.12 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 28.25 | 21.86 |
| KRH39836 | Soybean | nucleus, plastid | 30.18 | 21.46 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 27.13 | 20.39 |
| Solyc08g067150.2.1 | Tomato | nucleus | 31.14 | 19.64 |
| PGSC0003DMT400059571 | Potato | nucleus, plastid | 27.93 | 19.53 |
| GSMUA_Achr9P06330_001 | Banana | cytosol | 14.45 | 17.79 |
| GSMUA_Achr2P09150_001 | Banana | cytosol | 14.77 | 17.62 |
| GSMUA_Achr6P26760_001 | Banana | nucleus | 15.09 | 16.88 |
| GSMUA_Achr3P31550_001 | Banana | nucleus | 13.32 | 14.19 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P17070_001 | EnsemblPlants:GSMUA_Achr2T17070_001 | EnsemblPlantsGene:GSMUA_Achr2G17070_001 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam |
| InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF21 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg |
| SMART:SM01114 | UniParc:UPI0002968696 | UniProt:M0S8P8 | MapMan:15.5.9 | : | : |
Description
Putative Cysteine-rich polycomb-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G17070_001]
Coordinates
chr2:-:17746033..17750432
Molecular Weight (calculated)
68405.0 Da
IEP (calculated)
8.075
GRAVY (calculated)
-0.692
Length
623 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKRLQFEAI ENHKTDGECK KLIKNFICDI TSEEPLEISL HMNTSDPSHV KPIEASGMKQ GSQLISQGHL CKSVDRVDVS GQKKGDSSVT DPRPSGIGLH
101: LNTVGSVGHN NCSMMVQALG KDSCMEEESF LGNSEQISQG SNSELVSPGL TGKISFTLTA NSEKPMPDNT CDDTGDKHLQ NDMMELTISS ISHQTPLSTK
201: PIECSMQPRL TDQYVTPCSL KRPLSVDDSK LNLSSQSSPR KKRKKASDNE GQKRCSCKRS KCLKLYCDCF AAGTFCSEVC GCQQCVNRPE NEDTIHEARQ
301: QIESRNPLAF APKVVLYVSN PPKDSEESTG TTPSSARHKR GCNCKKSLCL KKYCECYQAG VGCSFGCRCE GCKNTFGRKD GKRCADIIEI EHMKSKEQKL
401: VRDPSAENSK EKLVTREVNL HLSPLTPSIQ SSNKSTFEMA REDNMLLVPD DQEIDFDIKV DTFSPGWDGF PDICNFSPLP NPPPSNDGAS VSFKTKEPKI
501: LQTRLFQGSS LVGTPLRWRS SPVTPLPQFG KSKILLEPDS DNGPNKSVGD DAPEVLEDPC SPIKAVTASS PKQKRVSPPK RLFQETRSSS SSGLRSGRKF
601: ILQSVPSFPP LTPYSKNSRG SGT
101: LNTVGSVGHN NCSMMVQALG KDSCMEEESF LGNSEQISQG SNSELVSPGL TGKISFTLTA NSEKPMPDNT CDDTGDKHLQ NDMMELTISS ISHQTPLSTK
201: PIECSMQPRL TDQYVTPCSL KRPLSVDDSK LNLSSQSSPR KKRKKASDNE GQKRCSCKRS KCLKLYCDCF AAGTFCSEVC GCQQCVNRPE NEDTIHEARQ
301: QIESRNPLAF APKVVLYVSN PPKDSEESTG TTPSSARHKR GCNCKKSLCL KKYCECYQAG VGCSFGCRCE GCKNTFGRKD GKRCADIIEI EHMKSKEQKL
401: VRDPSAENSK EKLVTREVNL HLSPLTPSIQ SSNKSTFEMA REDNMLLVPD DQEIDFDIKV DTFSPGWDGF PDICNFSPLP NPPPSNDGAS VSFKTKEPKI
501: LQTRLFQGSS LVGTPLRWRS SPVTPLPQFG KSKILLEPDS DNGPNKSVGD DAPEVLEDPC SPIKAVTASS PKQKRVSPPK RLFQETRSSS SSGLRSGRKF
601: ILQSVPSFPP LTPYSKNSRG SGT
001: MDSPVFNYIN SLSPIRPVRS IPNPNQFSSL NFTSPPSVFT SPHLTSSHKE SRFFKTHNSS SSDPTNSVES QEDESTSHEE VPAEGEDTKG LNIDDCMREE
101: ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE AFRCFMMQRA SNSEARFRNG
201: VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD CKTNVTQDYS CSANIQVGLQ
301: RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE PCSCIDCFNK PIHEDVVLAT
401: RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK DGSSIDMEAE QEEENETSEK
501: SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE KSFETVAVDG AEQMPEILIH
601: SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
101: ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE AFRCFMMQRA SNSEARFRNG
201: VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD CKTNVTQDYS CSANIQVGLQ
301: RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE PCSCIDCFNK PIHEDVVLAT
401: RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK DGSSIDMEAE QEEENETSEK
501: SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE KSFETVAVDG AEQMPEILIH
601: SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
Arabidopsis Description
TCX2Protein tesmin/TSO1-like CXC 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JIF5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.