Factsheet for GSMUA_Achr9P10600_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
golgi 1
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	golgi, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P20460_001	Banana	nucleus	74.66	68.45
Os03t0638300-01	Rice	cytosol	9.21	60.18
GSMUA_Achr9P25670_001	Banana	nucleus	66.8	59.47
CDY34235	Canola	endoplasmic reticulum, extracellular, vacuole	18.56	47.9
CDY54822	Canola	cytosol, plastid	30.35	40.8
CDY64240	Canola	cytosol, plastid	32.79	40.6
CDY10668	Canola	nucleus, plastid	31.44	40.42
VIT_05s0020g03880.t01	Wine grape	nucleus	41.73	40.37
AT3G22760.1	Thale cress	nucleus	33.06	40.07
Bra033920.1-P	Field mustard	plastid	31.17	40.0
CDY67857	Canola	nucleus, plastid	32.66	39.9
AT4G14770.1	Thale cress	nucleus	36.04	39.47
Bra023810.1-P	Field mustard	nucleus, plastid	31.44	39.19
Bra036900.1-P	Field mustard	nucleus, plastid	33.6	38.45
CDY42785	Canola	nucleus, plastid	34.01	38.2
CDY29770	Canola	nucleus, plastid	33.47	38.18
AT3G22780.1	Thale cress	nucleus	35.5	37.7
VIT_14s0030g01800.t01	Wine grape	nucleus	41.06	37.59
Os07t0176200-01	Rice	nucleus	39.43	37.21
CDY64242	Canola	nucleus	13.28	37.12
CDY54821	Canola	nucleus	34.01	36.97
KRH35487	Soybean	nucleus	37.67	36.58
TraesCS4D01G026100.1	Wheat	nucleus	38.75	36.34
OQU88523	Sorghum	nucleus	38.21	36.34
PGSC0003DMT400082098	Potato	nucleus	40.51	36.2
KRG91344	Soybean	nucleus	37.94	36.18
KRH27657	Soybean	nucleus	37.94	36.18
Solyc09g082500.2.1	Tomato	nucleus	40.51	36.07
TraesCS4B01G028500.1	Wheat	nucleus	38.21	35.74
KRH77830	Soybean	nucleus	37.4	35.66
Os12t0605500-01	Rice	nucleus	36.72	35.66
TraesCS5D01G065300.1	Wheat	nucleus	36.72	35.42
TraesCS5B01G062400.1	Wheat	nucleus	36.72	35.42
TraesCS5A01G053800.1	Wheat	nucleus	36.72	35.42
HORVU5Hr1G012950.1	Barley	nucleus	36.72	35.38
EES17353	Sorghum	nucleus	36.45	35.07
TraesCS4A01G284600.2	Wheat	nucleus	38.35	33.81
CDY10669	Canola	nucleus	33.47	33.02
Zm00001d018930_P003	Maize	nucleus	36.86	32.93
Bra033919.1-P	Field mustard	nucleus	33.33	32.89
Zm00001d031009_P004	Maize	golgi, plasma membrane	36.72	32.57
Zm00001d041445_P007	Maize	golgi, nucleus, plasma membrane	36.86	32.54
HORVU4Hr1G004280.15	Barley	nucleus, plastid	38.21	30.55
EER93767	Sorghum	nucleus	30.89	30.52
Zm00001d033274_P005	Maize	nucleus	28.59	28.75
GSMUA_Achr2P17070_001	Banana	nucleus	23.71	28.09
CDX94892	Canola	nucleus, plastid	34.82	20.71
CDX92957	Canola	nucleus, plastid	33.33	20.23
Bra001884.1-P	Field mustard	nucleus, plastid	33.06	19.95
GSMUA_Achr9P06330_001	Banana	cytosol	12.06	17.59
GSMUA_Achr6P26760_001	Banana	nucleus	12.74	16.88
GSMUA_Achr2P09150_001	Banana	cytosol	11.79	16.67
GSMUA_Achr3P31550_001	Banana	nucleus	11.25	14.19

Protein Annotations

EnsemblPlants:GSMUA_Achr9P10600_001	EnsemblPlants:GSMUA_Achr9T10600_001	EnsemblPlantsGene:GSMUA_Achr9G10600_001	InterPro:CRC	InterPro:IPR005172	InterPro:Lin-54_fam
InterPro:Tesmin/TSO1-like_CXC	PANTHER:PTHR12446	PANTHER:PTHR12446:SF21	PFAM:PF03638	PFscan:PS51634	SMART:SM01114
UniParc:UPI00029599B6	UniProt:M0TZ69	MapMan:15.5.9	:	:	:

Description

Putative tesmin/TSO1-like CXC domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G10600_001]

Coordinates

chr9:+:6907031..6911698

Molecular Weight (calculated)

81115.0 Da

IEP (calculated)

6.670

GRAVY (calculated)

-0.688

Length

738 amino acids

Sequence
(BLAST)

001: MLQESPIFNF INNLSPIQPV KSIDSVHIAH TYQSLNFASL SSIFSSPHAN PPRETRVLSR PPFTDTTKQE NFASNVGESN LCSEVSDAVR PSRFTASTRG
101: NYTTCSLNEA ALDPSDQCPS LHSPFPQSTQ YNSGSPDHNM PTHFGIKMDP NLDIGHTPVE IHLVQNGGER RKILFAMEAG FQGNHPHELN KDEVVGCDWE
201: SLISDDVESL LIFDSSTESE AHNEVGEKGM DCDGNSLVSV LSNCTENADH QQATQPDISL GAFVHNVNQD PSLNSNEDSR KENETDHATN LLSGTCQAQN
301: LHLKHTYLVD CHQKRGMHRR CLVFERICDG NNLEPKISRS LCALSGIGLH LNTLATTSKD RMDNSLRKPF SAEKDLRPSG SELDPQIISY DAPKDGKPNN
401: SEELNQGSPK KKRRKSENGG ESEGCKRCNC KKSKCLKLYC ECFAAGVYCS EPCSCQGCFN KPIHEETVLA TRKQIESRNP LAFAPKVIRT SDSGLDMGDD
501: DKKTPASARH KRGCNCKKSN CLKKYCECYQ GGVGCSISCR CEGCKNLYGR KDGILPGVEE IEQVEKEPDV CEKENESSDD VQLHHATNVQ VDEHHTYGEV
601: LPITPYQHCR LSVELPFSSS AKPTRPTKLS IGRSPGLYGF HMLQKSEIIL PQPKFENKGS TVLEDDTPAI LKPIASPTMG VNISSPNRKR VSPPHNGGVG
701: SSPPNRKGCR KLILKSIPSF PSLTGDASTE SPVNYSNS

Best Arabidopsis Sequence Match ( AT4G14770.3 )
(BLAST)

001: MQDSPVFNYI NSLSPIRPVR SIPNPNQFSS LNFTSPPSVF TSPHLTSSHK ESRFFKTHNS SSSDPTNSVE SQEDESTSHE EVPAEGEDTK GLNIDDCMRE
101: EASVETNLDD SVASPCGGNT TDLSLVPYAP TRGEDGSCED NGMELQKMHD NVQGKTETPD WESLIADASE LLIFDSPDAS EAFRCFMMQR ASNSEARFRN
201: GVEKQTMQHD SNKEPESANA IPYEAVSLLH RGIRRRCLDF EMPGNKQTSS ENNTAACESS SRCVVPSIGL HLNAILMSSK DCKTNVTQDY SCSANIQVGL
301: QRSISTLQDS LDQTENEIRE DADQDVPVEP ALQELNLSSP KKKRVKLDSG EGESCKRCNC KKSKCLKLYC ECFAAGVYCI EPCSCIDCFN KPIHEDVVLA
401: TRKQIESRNP LAFAPKVIRN SDSVQETGDD ASKTPASARH KRGCNCKKSN CLKKYCECYQ GGVGCSINCR CEGCKNAFGR KDGSSIDMEA EQEEENETSE
501: KSRTAKSQQN TEVLMRKDMS SALPTTPTPI YRPELVQLPF SSSKNRMPPP QSLLGGGSSS GIFNSQYLRK PDISLSQSRI EKSFETVAVD GAEQMPEILI
601: HSPIPNIKSV SPNGKRVSPP HMESSSSGSI LGRRNGGRKL ILQSIPSFPS LTPQH

Arabidopsis Description

TCX2Protein tesmin/TSO1-like CXC 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JIF5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.