Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G026100.1 | Wheat | nucleus | 95.82 | 96.06 |
| TraesCS4A01G284600.2 | Wheat | nucleus | 94.68 | 89.25 |
| HORVU4Hr1G004280.15 | Barley | nucleus, plastid | 89.86 | 76.81 |
| Os07t0176200-01 | Rice | nucleus | 73.13 | 73.79 |
| OQU88523 | Sorghum | nucleus | 69.45 | 70.62 |
| Zm00001d018930_P003 | Maize | nucleus | 64.64 | 61.74 |
| CDY34235 | Canola | endoplasmic reticulum, extracellular, vacuole | 15.84 | 43.71 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 35.74 | 38.21 |
| AT4G14770.1 | Thale cress | nucleus | 32.07 | 37.54 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 38.02 | 37.27 |
| TraesCS5B01G062400.1 | Wheat | nucleus | 35.99 | 37.12 |
| Bra036900.1-P | Field mustard | nucleus, plastid | 30.16 | 36.9 |
| CDY29770 | Canola | nucleus, plastid | 30.16 | 36.79 |
| CDY67857 | Canola | nucleus, plastid | 28.14 | 36.76 |
| AT3G22760.1 | Thale cress | nucleus | 28.26 | 36.62 |
| CDY42785 | Canola | nucleus, plastid | 30.42 | 36.53 |
| CDY10668 | Canola | nucleus, plastid | 26.49 | 36.41 |
| Bra023810.1-P | Field mustard | nucleus, plastid | 27.0 | 35.98 |
| CDY64240 | Canola | cytosol, plastid | 27.12 | 35.91 |
| CDY54822 | Canola | cytosol, plastid | 24.97 | 35.88 |
| Bra033920.1-P | Field mustard | plastid | 25.98 | 35.65 |
| VIT_05s0020g03880.t01 | Wine grape | nucleus | 33.59 | 34.73 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 35.74 | 34.02 |
| KRH27657 | Soybean | nucleus | 33.21 | 33.85 |
| KRH77830 | Soybean | nucleus | 32.83 | 33.46 |
| AT3G22780.1 | Thale cress | nucleus | 29.4 | 33.38 |
| CDY54821 | Canola | nucleus | 28.64 | 33.28 |
| CDY64242 | Canola | nucleus | 10.9 | 32.58 |
| KRG91344 | Soybean | nucleus | 31.43 | 32.04 |
| KRH35487 | Soybean | nucleus | 30.8 | 31.97 |
| VIT_14s0030g01800.t01 | Wine grape | nucleus | 32.19 | 31.51 |
| Solyc09g082500.2.1 | Tomato | nucleus | 32.57 | 31.0 |
| PGSC0003DMT400082098 | Potato | nucleus | 32.32 | 30.87 |
| CDY10669 | Canola | nucleus | 28.64 | 30.21 |
| Bra033919.1-P | Field mustard | nucleus | 28.64 | 30.21 |
| TraesCS1B01G340500.1 | Wheat | cytosol, plastid | 14.07 | 29.68 |
| TraesCS5B01G062200.1 | Wheat | nucleus, plastid | 12.55 | 27.5 |
| TraesCS1B01G411800.1 | Wheat | nucleus | 8.37 | 25.19 |
| TraesCS3B01G249700.1 | Wheat | nucleus | 8.24 | 24.9 |
| CDX92957 | Canola | nucleus, plastid | 28.9 | 18.75 |
| CDX94892 | Canola | nucleus, plastid | 29.15 | 18.53 |
| Bra001884.1-P | Field mustard | nucleus, plastid | 28.39 | 18.32 |
| TraesCS7B01G242300.1 | Wheat | nucleus | 10.52 | 17.11 |
| TraesCS2B01G144400.2 | Wheat | plastid | 11.91 | 15.96 |
| TraesCS3B01G331700.1 | Wheat | plastid | 11.91 | 15.28 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G028500.1 | EnsemblPlantsGene:TraesCS4B01G028500 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| ncoils:Coil | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF43 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg |
| SMART:SM01114 | MapMan:15.5.9 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:21187173..21192244
Molecular Weight (calculated)
84922.0 Da
IEP (calculated)
7.039
GRAVY (calculated)
-0.689
Length
789 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTPDRAAAP AAAARAEDSP LFGFIDSLSP IEPLKSAYSG NGLQAYHQSL NAASVSSIFT SPHHNAHKEG SKLSKSSFGD YTENEISMED GTDKNKSPTS
101: STAVRLFACT STITRESHTM ITCSVNEGIV DPPKGPNDLP QPGRFDSGSP DHNTAPCHGV SVRSDLKQDK CPKLEAVQAT NNTVEKRKCL FSSDMQPQDG
201: CQPAKENNEV MGCEWEDLVS VTSGELLAFD SSMDQHHTGV QLAVNNAESC GYLLSKLAGG ADIPDRTHPT TSSQAYYHEM VVGEDKTENG QLFPEDKKTI
301: LSEEIQDNIN EENACIPLGC KVETQQRGVR RRCLVFEASG YSHRTVQKES VGDLSFSTSK GKSSAQNHRN PGKTPSPHVF RGIGLHLNAL ALTSKDKMAC
401: QDPLATALVP SLKTEQDVHG NLLSAGGNFV HSGSGSLDLQ MDNDDCSVGG FLGNDHNSSQ SSSPPKKRRK SDNGDDDSCK RCSCKKSKCL KLYCECFAAG
501: VYCSEPCSCQ GCLNKPIHEE IVLSTRKQIE FRNPLAFAPK VIRMSEAGQE TQEDPKNTPA SARHKRGCNC KKSSCLKKYC ECYQGGVGCS NNCRCETCKN
601: TFGTRDVAVS TENEEMKQEG DQTENREQEK ENDQQKANVH SEDHKLVELV VPITPPLDVS SCLLKQPNFS NAKPPRPCKA RSGSSSRPSK ASETVQSRKT
701: SKAGDSVFIE EMRGILREPS SPGIVKTCSP NGKRVSPPHN ALGVSPSRKG GRKLILKSIP SFPSLAGDAN GGSATCSSDS ATALALGPS
101: STAVRLFACT STITRESHTM ITCSVNEGIV DPPKGPNDLP QPGRFDSGSP DHNTAPCHGV SVRSDLKQDK CPKLEAVQAT NNTVEKRKCL FSSDMQPQDG
201: CQPAKENNEV MGCEWEDLVS VTSGELLAFD SSMDQHHTGV QLAVNNAESC GYLLSKLAGG ADIPDRTHPT TSSQAYYHEM VVGEDKTENG QLFPEDKKTI
301: LSEEIQDNIN EENACIPLGC KVETQQRGVR RRCLVFEASG YSHRTVQKES VGDLSFSTSK GKSSAQNHRN PGKTPSPHVF RGIGLHLNAL ALTSKDKMAC
401: QDPLATALVP SLKTEQDVHG NLLSAGGNFV HSGSGSLDLQ MDNDDCSVGG FLGNDHNSSQ SSSPPKKRRK SDNGDDDSCK RCSCKKSKCL KLYCECFAAG
501: VYCSEPCSCQ GCLNKPIHEE IVLSTRKQIE FRNPLAFAPK VIRMSEAGQE TQEDPKNTPA SARHKRGCNC KKSSCLKKYC ECYQGGVGCS NNCRCETCKN
601: TFGTRDVAVS TENEEMKQEG DQTENREQEK ENDQQKANVH SEDHKLVELV VPITPPLDVS SCLLKQPNFS NAKPPRPCKA RSGSSSRPSK ASETVQSRKT
701: SKAGDSVFIE EMRGILREPS SPGIVKTCSP NGKRVSPPHN ALGVSPSRKG GRKLILKSIP SFPSLAGDAN GGSATCSSDS ATALALGPS
001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
Arabidopsis Description
TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.