Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G393200.1 | Wheat | cytosol | 66.03 | 96.11 |
| TraesCS3B01G249700.1 | Wheat | nucleus | 91.98 | 92.34 |
| TraesCS7B01G242300.1 | Wheat | nucleus | 25.57 | 13.81 |
| TraesCS5B01G062200.1 | Wheat | nucleus, plastid | 17.18 | 12.5 |
| TraesCS1B01G340500.1 | Wheat | cytosol, plastid | 16.41 | 11.5 |
| TraesCS2B01G144400.2 | Wheat | plastid | 23.66 | 10.53 |
| TraesCS3B01G331700.1 | Wheat | plastid | 24.43 | 10.41 |
| TraesCS5B01G062400.1 | Wheat | nucleus | 25.95 | 8.89 |
| TraesCS4B01G028500.1 | Wheat | nucleus | 25.19 | 8.37 |
| Bra041164.1-P | Field mustard | nucleus | 2.67 | 7.07 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G411800.1 | EnsemblPlantsGene:TraesCS1B01G411800 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg | SMART:SM01114 | MapMan:15.5.9 |
Description
No Description!
Coordinates
chr1B:-:637912916..637915482
Molecular Weight (calculated)
28157.8 Da
IEP (calculated)
4.623
GRAVY (calculated)
-0.572
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDLPHCTCE KTQCLQRYCH CFEASVFCDE GCSCQGCRNT EDNSDEVDER AECIMKKKPD AFKPKIIAGD GPGLQQQQQQ AAGVHVKGCN CRNSECKKLY
101: CECFKHGVGC SDKCQCTGCG NTFGVKGAAQ QAHSDSPEGT SGGSGETLAR SNGSSAIIND YMASQLTEIR IMDDIHIPGK LSHMDVDLGP PTQDLGDGGL
201: EDIIFYSDFQ QIIDPQAHQG LAQQADASLS NDTNSLLEQG PSKTDTCDLL HHGSQINKLG GI
101: CECFKHGVGC SDKCQCTGCG NTFGVKGAAQ QAHSDSPEGT SGGSGETLAR SNGSSAIIND YMASQLTEIR IMDDIHIPGK LSHMDVDLGP PTQDLGDGGL
201: EDIIFYSDFQ QIIDPQAHQG LAQQADASLS NDTNSLLEQG PSKTDTCDLL HHGSQINKLG GI
001: MDTPDKNRIS AVSFCNFEDS PVFQYINDLS PIEPVKPGRP ENILHSLVFT SPSSSSSLFC SPQLNSYRDS RFFIKRHRSL DLSSPVVLIG ETLKNSPDAL
101: WEEKLKCRPE KLENVSEPKP FKEQISLAIE LANSLKHGRD GCDIQMVSCD EVPMDADDEI GSGGGSRELS DELCRQSFDP LDFDADSDGV LHTDEMEAES
201: GFGKEVIMFD VADIQNYEQQ IPRTTDPRFY SLASEPQQFS IYCNNSNYVE EREGSCSVQV AAGAPDINLS CSSKVAAIDS TAEAEDKEDK DLQPSGKQRS
301: VRRRCLTFDM GGSHKRIPLR DSTNDLPLDS TSINKAPSPQ NCLDTSKQDT DEILPIPRTI GLHLNGFVNP SVSSGRKKKK IKDGQAFPST TFHYNIEDEF
401: STPVSTKRDL VVFSDVKIME PPERSVEGEC FDQLMAMENR QLSQGLDELG SCKRCKCRKS QCLKLYCECF SAGLFCGEPC SCQNCFNKPI HEDLVMKSRE
501: VIKARNPLAF APKVVSTSDT VIDLWVENSK TPASARHKRG CNCRKSGCSK KYCECFMMGV GCSSNCRCMG CKNTFGHTNE QCAGDSDVVT INDEAKHYGD
601: HGDASRQNEE ILTSERNRLL LPGSVAFRSL TSLSNLSEL
101: WEEKLKCRPE KLENVSEPKP FKEQISLAIE LANSLKHGRD GCDIQMVSCD EVPMDADDEI GSGGGSRELS DELCRQSFDP LDFDADSDGV LHTDEMEAES
201: GFGKEVIMFD VADIQNYEQQ IPRTTDPRFY SLASEPQQFS IYCNNSNYVE EREGSCSVQV AAGAPDINLS CSSKVAAIDS TAEAEDKEDK DLQPSGKQRS
301: VRRRCLTFDM GGSHKRIPLR DSTNDLPLDS TSINKAPSPQ NCLDTSKQDT DEILPIPRTI GLHLNGFVNP SVSSGRKKKK IKDGQAFPST TFHYNIEDEF
401: STPVSTKRDL VVFSDVKIME PPERSVEGEC FDQLMAMENR QLSQGLDELG SCKRCKCRKS QCLKLYCECF SAGLFCGEPC SCQNCFNKPI HEDLVMKSRE
501: VIKARNPLAF APKVVSTSDT VIDLWVENSK TPASARHKRG CNCRKSGCSK KYCECFMMGV GCSSNCRCMG CKNTFGHTNE QCAGDSDVVT INDEAKHYGD
601: HGDASRQNEE ILTSERNRLL LPGSVAFRSL TSLSNLSEL
Arabidopsis Description
TCX4Protein tesmin/TSO1-like CXC 4 [Source:UniProtKB/Swiss-Prot;Acc:Q84JZ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.