Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G122300.2 | Wheat | plastid | 95.25 | 95.41 |
| TraesCS2D01G125000.1 | Wheat | plastid | 94.23 | 94.39 |
| HORVU2Hr1G021360.2 | Barley | plastid | 88.79 | 85.88 |
| Os08t0369600-01 | Rice | cytosol, nucleus, peroxisome | 31.24 | 49.86 |
| Os08t0363900-00 | Rice | cytosol | 29.88 | 49.58 |
| TraesCS3B01G331700.1 | Wheat | plastid | 32.43 | 31.06 |
| TraesCS7B01G242300.1 | Wheat | nucleus | 24.62 | 29.9 |
| CDY19795 | Canola | nucleus | 23.09 | 29.89 |
| Bra036551.1-P | Field mustard | nucleus | 22.92 | 29.61 |
| CDY65712 | Canola | nucleus | 22.24 | 28.6 |
| AT3G16160.1 | Thale cress | nucleus | 17.83 | 28.53 |
| CDY05340 | Canola | nucleus | 22.92 | 28.24 |
| AT5G25790.2 | Thale cress | nucleus | 24.11 | 28.17 |
| Bra009859.1-P | Field mustard | nucleus | 23.77 | 27.5 |
| CDX88196 | Canola | nucleus | 23.77 | 27.45 |
| CDX80536 | Canola | nucleus | 23.94 | 27.17 |
| CDY28377 | Canola | nucleus | 15.11 | 27.13 |
| Bra021165.1-P | Field mustard | nucleus | 14.6 | 26.38 |
| CDY20184 | Canola | cytosol | 15.11 | 26.18 |
| TraesCS1B01G411800.1 | Wheat | nucleus | 10.53 | 23.66 |
| TraesCS3B01G249700.1 | Wheat | nucleus | 10.36 | 23.37 |
| TraesCS5B01G062200.1 | Wheat | nucleus, plastid | 11.21 | 18.33 |
| TraesCS1B01G340500.1 | Wheat | cytosol, plastid | 10.53 | 16.58 |
| TraesCS4B01G028500.1 | Wheat | nucleus | 15.96 | 11.91 |
| TraesCS5B01G062400.1 | Wheat | nucleus | 13.75 | 10.59 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G144400.2 | EnsemblPlantsGene:TraesCS2B01G144400 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF45 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg | SMART:SM01114 |
| MapMan:15.5.9 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:110479845..110484223
Molecular Weight (calculated)
65211.2 Da
IEP (calculated)
8.952
GRAVY (calculated)
-0.503
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNPLNLPPG SVQPNFCSAF YARKSGSAAT AASLSQALPL WPPVPWPTLM VRKHHMPFPT QPAAKKLQVR RLSPVLSQDL PLREALQVAE LPPPRVQLRP
101: LQQAPPVLKQ SLPKTEVPVV LPMRATSVDV RWNARYPWSE TSCESTDRTS RRTQCKCKNS KCLKKYCECF ASGRYCNDCN CKNCYNNVGH EAARQVAIDA
201: AMERNPMAFM PKIGNIPPHA AQNREFKVAE GPLVGKHMKG CHCKRSECLK KYCECFRSNI LCSENCKCMD CKNYESNEDR KAIRRITRHQ QHLVYAHHMQ
301: NPATMGITGP YAALSPAAEK LSNLSVASSG RDQLINNNDS SQVTSSLLTP VPIEGTKSAV KVEPHGVTYR PLLADVIQIE NVNELCKVLL LVSRQAAGAS
401: VGVKENTNRR KLDQADSCLS SINHDMEAVE KQRDEQVCST ENSLTAVPVS EVRAGAARSD PSDTCKYDRR PVSPETQKLM CNEQDRLFLT PSVAAVIPSA
501: TKQRLPDTYK EQEKRILKTL HDYLGELVNC GRLHEEKLSS MPSKFFHEQT SVGSSCGSSS VSRVAEVARV GQTIRQSLHS PASVKSPGL
101: LQQAPPVLKQ SLPKTEVPVV LPMRATSVDV RWNARYPWSE TSCESTDRTS RRTQCKCKNS KCLKKYCECF ASGRYCNDCN CKNCYNNVGH EAARQVAIDA
201: AMERNPMAFM PKIGNIPPHA AQNREFKVAE GPLVGKHMKG CHCKRSECLK KYCECFRSNI LCSENCKCMD CKNYESNEDR KAIRRITRHQ QHLVYAHHMQ
301: NPATMGITGP YAALSPAAEK LSNLSVASSG RDQLINNNDS SQVTSSLLTP VPIEGTKSAV KVEPHGVTYR PLLADVIQIE NVNELCKVLL LVSRQAAGAS
401: VGVKENTNRR KLDQADSCLS SINHDMEAVE KQRDEQVCST ENSLTAVPVS EVRAGAARSD PSDTCKYDRR PVSPETQKLM CNEQDRLFLT PSVAAVIPSA
501: TKQRLPDTYK EQEKRILKTL HDYLGELVNC GRLHEEKLSS MPSKFFHEQT SVGSSCGSSS VSRVAEVARV GQTIRQSLHS PASVKSPGL
001: MGEGEEGDKF PPKTDEVTQE SMKSARQLDF TGGSSDVEHS HSNQASSMAA ASIPSPIVTV TRPIITSQAP PTVATPIPPP PQSQGIILHV PIRHPRPESP
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT ANGVSQTAKQ PSQLTTTTTT PNTSSQTHLH KTPALSEKKD L
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT ANGVSQTAKQ PSQLTTTTTT PNTSSQTHLH KTPALSEKKD L
Arabidopsis Description
Tesmin/TSO1-like CXC domain-containing protein [Source:TAIR;Acc:AT2G20110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.