Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021165.1-P | Field mustard | nucleus | 91.47 | 95.4 |
| CDY28377 | Canola | nucleus | 90.88 | 94.21 |
| AT3G16160.1 | Thale cress | nucleus | 59.71 | 55.16 |
| CDY44573 | Canola | cytosol | 13.24 | 31.69 |
| CDY71540 | Canola | nucleus, plastid | 21.18 | 27.17 |
| CDY67603 | Canola | cytosol | 22.35 | 26.48 |
| HORVU7Hr1G081540.1 | Barley | plastid | 20.88 | 24.32 |
| CDY19795 | Canola | nucleus | 28.82 | 21.54 |
| Os06t0332700-00 | Rice | nucleus | 19.12 | 21.45 |
| CDY05340 | Canola | nucleus | 29.41 | 20.92 |
| CDY05722 | Canola | nucleus | 30.29 | 20.81 |
| CDY31991 | Canola | nucleus | 30.59 | 20.55 |
| CDY65712 | Canola | nucleus | 27.65 | 20.52 |
| CDX88196 | Canola | nucleus | 29.71 | 19.8 |
| CDY34235 | Canola | endoplasmic reticulum, extracellular, vacuole | 16.47 | 19.58 |
| Os02t0274600-00 | Rice | cytosol, nucleus | 25.0 | 19.45 |
| CDX80536 | Canola | nucleus | 29.12 | 19.08 |
| CDX97461 | Canola | nucleus | 30.88 | 18.55 |
| TraesCS7B01G242300.1 | Wheat | nucleus | 26.18 | 18.35 |
| CDY66476 | Canola | nucleus | 30.88 | 18.32 |
| TraesCS7A01G341100.2 | Wheat | nucleus, plastid | 26.18 | 18.31 |
| TraesCS7D01G338500.1 | Wheat | nucleus, plastid | 26.18 | 18.31 |
| EER89807 | Sorghum | cytosol | 27.35 | 18.27 |
| CDY35239 | Canola | nucleus | 31.18 | 18.18 |
| Zm00001d037461_P001 | Maize | cytosol | 27.06 | 18.0 |
| CDX92907 | Canola | nucleus | 28.82 | 17.56 |
| Os08t0369600-01 | Rice | cytosol, nucleus, peroxisome | 18.53 | 17.07 |
| Os08t0363900-00 | Rice | cytosol | 17.65 | 16.9 |
| CDX79489 | Canola | cytosol | 14.41 | 15.17 |
| TraesCS2A01G122300.2 | Wheat | plastid | 26.18 | 15.14 |
| TraesCS2B01G144400.2 | Wheat | plastid | 26.18 | 15.11 |
| Zm00001d015990_P001 | Maize | nucleus | 23.24 | 14.91 |
| TraesCS2D01G125000.1 | Wheat | plastid | 25.59 | 14.8 |
| KXG30022 | Sorghum | nucleus, plastid | 22.65 | 14.18 |
| HORVU2Hr1G021360.2 | Barley | plastid | 25.29 | 14.12 |
| CDY64242 | Canola | nucleus | 10.29 | 13.26 |
| CDY54822 | Canola | cytosol, plastid | 20.0 | 12.39 |
| CDY10668 | Canola | nucleus, plastid | 19.71 | 11.67 |
| CDY64240 | Canola | cytosol, plastid | 19.71 | 11.24 |
| CDY67857 | Canola | nucleus, plastid | 19.71 | 11.09 |
| CDY29770 | Canola | nucleus, plastid | 20.59 | 10.82 |
| CDY42785 | Canola | nucleus, plastid | 20.59 | 10.65 |
| CDY54821 | Canola | nucleus | 20.88 | 10.46 |
| CDX74164 | Canola | nucleus | 15.59 | 10.15 |
| CDY10669 | Canola | nucleus | 20.88 | 9.49 |
| CDY40681 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 15.0 | 9.39 |
| CDY06853 | Canola | cytosol, nucleus, plastid | 30.88 | 7.46 |
| CDX92957 | Canola | nucleus, plastid | 21.18 | 5.92 |
| CDX94892 | Canola | nucleus, plastid | 21.18 | 5.8 |
Protein Annotations
| EnsemblPlants:CDY20184 | EnsemblPlantsGene:GSBRNA2T00010055001 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 | ProteinID:CDY20184 | ProteinID:CDY20184.1 |
| SEG:seg | SMART:SM01114 | UniParc:UPI0004EF1FBE | UniProt:A0A078G469 | MapMan:15.5.9 | : |
Description
BnaA01g28180DBnaA01g28180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G469]
Coordinates
chrLK032103:-:586184..589387
Molecular Weight (calculated)
38128.2 Da
IEP (calculated)
7.687
GRAVY (calculated)
-0.607
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSPTNLLLI FSGEREGNNN TDHQEGVTGR KQKRCRCRQS KCLKLYCDCF ASGVLCNDCD CADCHNNTDN SYLREAAVLN LLDRNPNAFN GKPPSFLINK
101: QAAADTKHGL LSRGCKCKRT KCLKKYCECF QANALCSYNC KCINCENVSA LGATNRHNVG FNTPDSLICA PQSSLQQWNS CPAPLSSMPD NYVLDSLESP
201: MYSSPKLPYR KKRSRLGCTT PKLVPDLGDL RSLLLAASES ATANAGLQDK NSICIKPDDK ELWNESESGI VEEEDIQSCG RLIQLIDAQY NDEVDPQTKT
301: IFPERDAYME QERAVLETFR DCLHKYMKVG FKKGTNYYHF
101: QAAADTKHGL LSRGCKCKRT KCLKKYCECF QANALCSYNC KCINCENVSA LGATNRHNVG FNTPDSLICA PQSSLQQWNS CPAPLSSMPD NYVLDSLESP
201: MYSSPKLPYR KKRSRLGCTT PKLVPDLGDL RSLLLAASES ATANAGLQDK NSICIKPDDK ELWNESESGI VEEEDIQSCG RLIQLIDAQY NDEVDPQTKT
301: IFPERDAYME QERAVLETFR DCLHKYMKVG FKKGTNYYHF
001: MTGNADSGKI ATEKDPRKLV FTKLEVSPVF RESPVKELPL FPPISREHSE AKDKTDEEGI TSRKHKGCRC KQSKCLKLYC DCFASGVVCT DCDCVDCHNN
101: SEKCDAREAA MVNVLGRNPN AFSEKALGSL TDNQCKAAPD TKPGLLSRGC KCKRTRCLKK YCECFQANLL CSDNCKCINC KNVSEAFQPP AFSAHNSPQV
201: YRRRRDRELT EWNSCPAPLF SIPDNSIQNA LGSPMSCSPK LPYRKKRSLM GYTSTLLPDL GDLCSLLVAA SESATTTAED QNRIFTKPDD KEAIELSSES
301: ESRNVEEEIQ SRGRLIELID VQYNGEEDSQ CKTKTSVNET DIYMEQERAV LETFRDCLQK FIKSRLES
101: SEKCDAREAA MVNVLGRNPN AFSEKALGSL TDNQCKAAPD TKPGLLSRGC KCKRTRCLKK YCECFQANLL CSDNCKCINC KNVSEAFQPP AFSAHNSPQV
201: YRRRRDRELT EWNSCPAPLF SIPDNSIQNA LGSPMSCSPK LPYRKKRSLM GYTSTLLPDL GDLCSLLVAA SESATTTAED QNRIFTKPDD KEAIELSSES
301: ESRNVEEEIQ SRGRLIELID VQYNGEEDSQ CKTKTSVNET DIYMEQERAV LETFRDCLQK FIKSRLES
Arabidopsis Description
TCX8Protein tesmin/TSO1-like CXC 8 [Source:UniProtKB/Swiss-Prot;Acc:Q700D0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.