Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0332700-00 | Rice | nucleus | 32.49 | 46.86 |
| Zm00001d015990_P001 | Maize | nucleus | 52.4 | 43.21 |
| KXG30022 | Sorghum | nucleus, plastid | 52.17 | 41.99 |
| Os03t0638300-01 | Rice | cytosol | 8.7 | 33.63 |
| CDY65712 | Canola | nucleus | 31.12 | 29.69 |
| Bra036551.1-P | Field mustard | nucleus | 30.89 | 29.61 |
| CDY19795 | Canola | nucleus | 30.66 | 29.45 |
| AT5G25790.2 | Thale cress | nucleus | 33.41 | 28.97 |
| Bra009859.1-P | Field mustard | nucleus | 31.35 | 26.92 |
| CDX88196 | Canola | nucleus | 31.35 | 26.86 |
| CDX80536 | Canola | nucleus | 31.35 | 26.4 |
| Os01t0761100-01 | Rice | cytosol, nucleus, plastid | 37.07 | 26.17 |
| CDY28377 | Canola | nucleus | 18.99 | 25.3 |
| CDY05340 | Canola | nucleus | 27.46 | 25.1 |
| CDY20184 | Canola | cytosol | 19.45 | 25.0 |
| Bra021165.1-P | Field mustard | nucleus | 18.54 | 24.85 |
| AT3G16160.1 | Thale cress | nucleus | 19.22 | 22.83 |
| Os08t0363900-00 | Rice | cytosol | 16.7 | 20.56 |
| Os08t0369600-01 | Rice | cytosol, nucleus, peroxisome | 16.48 | 19.51 |
| Os05t0509400-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 14.65 | 17.11 |
| Os12t0605300-01 | Rice | nucleus | 14.19 | 15.23 |
| Os07t0176200-01 | Rice | nucleus | 20.37 | 11.38 |
| Os12t0605500-01 | Rice | nucleus | 19.45 | 11.18 |
Protein Annotations
| MapMan:15.5.9 | UniProt:A0A0N7KF31 | ProteinID:BAS78081.1 | InterPro:CRC | GO:GO:0001522 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006396 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009982 | GO:GO:0009987 | InterPro:IPR005172 |
| InterPro:Lin-54_fam | EnsemblPlantsGene:Os02g0274600 | EnsemblPlants:Os02t0274600-00 | PFAM:PF03638 | PFscan:PS51634 | PANTHER:PTHR12446 |
| PANTHER:PTHR12446:SF35 | SMART:SM01114 | InterPro:Tesmin/TSO1-like_CXC | UniParc:UPI0003938913 | : | : |
Description
Tesmin/TSO1-like, CXC domain containing protein. (Os02t0274600-00)
Coordinates
chr2:-:10042489..10047801
Molecular Weight (calculated)
49011.9 Da
IEP (calculated)
7.989
GRAVY (calculated)
-0.671
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: CSTFPRKPAV EVKNASPKKR KHCNCKNSRC LKLYCECFAA RVYCDGCHCS PCGNKIENEN IRKEAIETIL LRNPLAFQPK IENSPNTVTV RKDNSEAIPP
101: IPKHNKGCHC RKSECLKKYC ECFQANILCS KNCRCQDCKN FEGSEERKAL VQMKNASDRN HIQEAANFAL NGATGSLGYK NSPVRRKKYQ ENSLGEQILS
201: EAQFQPTDHA DVSQLASSCT GFGGDIAINY QSKSSEMIYR SPLANTIPLI EVNDLVKNAL VACRKAPEAF LTKAGNKVEM QAEKQYQTND EINNDKTKEQ
301: NLKEASLKDI QNKACIDRQN INGTEPHLAN SFKDSRPASP GTQALMCDEM DTTFGNEDYR SPFVVPSRDQ DISELNADQE RIVLTGLRDY LRVLITRGNI
401: NGECNLLTLD SNGIGFPEAS WSNNCFFPRQ IYVFQLS
101: IPKHNKGCHC RKSECLKKYC ECFQANILCS KNCRCQDCKN FEGSEERKAL VQMKNASDRN HIQEAANFAL NGATGSLGYK NSPVRRKKYQ ENSLGEQILS
201: EAQFQPTDHA DVSQLASSCT GFGGDIAINY QSKSSEMIYR SPLANTIPLI EVNDLVKNAL VACRKAPEAF LTKAGNKVEM QAEKQYQTND EINNDKTKEQ
301: NLKEASLKDI QNKACIDRQN INGTEPHLAN SFKDSRPASP GTQALMCDEM DTTFGNEDYR SPFVVPSRDQ DISELNADQE RIVLTGLRDY LRVLITRGNI
401: NGECNLLTLD SNGIGFPEAS WSNNCFFPRQ IYVFQLS
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.