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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY34235 Canola endoplasmic reticulum, extracellular, vacuole 39.82 15.73
CDY64240 Canola cytosol, plastid 57.52 10.91
CDY67857 Canola nucleus, plastid 57.52 10.76
CDY54822 Canola cytosol, plastid 52.21 10.75
Os05t0509400-01 Rice cytosol, nucleus, plasma membrane, plastid 35.4 10.7
Bra023810.1-P Field mustard nucleus, plastid 55.75 10.64
Bra033920.1-P Field mustard plastid 53.98 10.61
Os06t0332700-00 Rice nucleus 28.32 10.56
CDY10668 Canola nucleus, plastid 52.21 10.28
Bra036900.1-P Field mustard nucleus, plastid 57.52 10.08
CDY29770 Canola nucleus, plastid 57.52 10.05
CDY42785 Canola nucleus, plastid 57.52 9.89
AT3G22760.1 Thale cress nucleus 53.1 9.85
Os08t0363900-00 Rice cytosol 30.09 9.58
AT4G14770.1 Thale cress nucleus 55.75 9.35
CDY54821 Canola nucleus 55.75 9.28
GSMUA_Achr9P10600_001 Banana nucleus 60.18 9.21
Os08t0369600-01 Rice cytosol, nucleus, peroxisome 30.09 9.21
EER93767 Sorghum nucleus 59.29 8.97
Os12t0605500-01 Rice nucleus 60.18 8.95
AT3G22780.1 Thale cress nucleus 54.87 8.92
Zm00001d033274_P005 Maize nucleus 56.64 8.72
GSMUA_Achr8P20460_001 Banana nucleus 61.95 8.7
Os02t0274600-00 Rice cytosol, nucleus 33.63 8.7
Os12t0605300-01 Rice nucleus 30.97 8.6
Os07t0176200-01 Rice nucleus 57.52 8.31
Bra033919.1-P Field mustard nucleus 54.87 8.29
CDY10669 Canola nucleus 54.87 8.29
GSMUA_Achr9P25670_001 Banana nucleus 60.18 8.2
KRH35487 Soybean nucleus 53.98 8.03
KRH77830 Soybean nucleus 54.87 8.01
KRG91344 Soybean nucleus 54.87 8.01
KRH27657 Soybean nucleus 53.98 7.88
VIT_05s0020g03880.t01 Wine grape nucleus 53.1 7.86
VIT_14s0030g01800.t01 Wine grape nucleus 53.98 7.57
PGSC0003DMT400082098 Potato nucleus 53.1 7.26
Solyc09g082500.2.1 Tomato nucleus 53.1 7.24
Os01t0761100-01 Rice cytosol, nucleus, plastid 30.97 5.65
CDX92957 Canola nucleus, plastid 52.21 4.85
CDX94892 Canola nucleus, plastid 53.1 4.83
Bra001884.1-P Field mustard nucleus, plastid 52.21 4.82
CDY64242 Canola nucleus 6.19 2.65
Protein Annotations
EnsemblPlants:Os03t0638300-01EnsemblPlantsGene:Os03g0638300GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:CRC
InterPro:IPR005172InterPro:Lin-54_famInterPro:Tesmin/TSO1-like_CXCPANTHER:PTHR12446PANTHER:PTHR12446:SF21PFAM:PF03638
PFscan:PS51634ProteinID:BAH92282.1ProteinID:BAS85409.1SEG:segSMART:SM01114TMHMM:TMhelix
UniParc:UPI0001B662CAUniProt:C7IZN4MapMan:15.5.9:::
Description
Tesmin/TSO1-like, CXC domain containing protein. (Os03t0638300-01)
Coordinates
chr3:-:24454477..24457481
Molecular Weight (calculated)
12916.6 Da
IEP (calculated)
8.330
GRAVY (calculated)
-0.138
Length
113 amino acids
Sequence
(BLAST)
001: NHVEFCRQKC QNDNVDSCKR CSCKKSKCLK LYCECFASKV YCSESCSCRG CFNDHSHEET VLSTRNRIES RNPLAFAPKV IRTCGPGLEF GVRAHSFCFS
101: FLSLLLITFF FMA
Best Arabidopsis Sequence Match ( AT3G22780.1 )
(BLAST)
001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
Arabidopsis Description
TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.