Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY34235 | Canola | endoplasmic reticulum, extracellular, vacuole | 39.82 | 15.73 |
CDY64240 | Canola | cytosol, plastid | 57.52 | 10.91 |
CDY67857 | Canola | nucleus, plastid | 57.52 | 10.76 |
CDY54822 | Canola | cytosol, plastid | 52.21 | 10.75 |
Os05t0509400-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 35.4 | 10.7 |
Bra023810.1-P | Field mustard | nucleus, plastid | 55.75 | 10.64 |
Bra033920.1-P | Field mustard | plastid | 53.98 | 10.61 |
Os06t0332700-00 | Rice | nucleus | 28.32 | 10.56 |
CDY10668 | Canola | nucleus, plastid | 52.21 | 10.28 |
Bra036900.1-P | Field mustard | nucleus, plastid | 57.52 | 10.08 |
CDY29770 | Canola | nucleus, plastid | 57.52 | 10.05 |
CDY42785 | Canola | nucleus, plastid | 57.52 | 9.89 |
AT3G22760.1 | Thale cress | nucleus | 53.1 | 9.85 |
Os08t0363900-00 | Rice | cytosol | 30.09 | 9.58 |
AT4G14770.1 | Thale cress | nucleus | 55.75 | 9.35 |
CDY54821 | Canola | nucleus | 55.75 | 9.28 |
GSMUA_Achr9P10600_001 | Banana | nucleus | 60.18 | 9.21 |
Os08t0369600-01 | Rice | cytosol, nucleus, peroxisome | 30.09 | 9.21 |
EER93767 | Sorghum | nucleus | 59.29 | 8.97 |
Os12t0605500-01 | Rice | nucleus | 60.18 | 8.95 |
AT3G22780.1 | Thale cress | nucleus | 54.87 | 8.92 |
Zm00001d033274_P005 | Maize | nucleus | 56.64 | 8.72 |
GSMUA_Achr8P20460_001 | Banana | nucleus | 61.95 | 8.7 |
Os02t0274600-00 | Rice | cytosol, nucleus | 33.63 | 8.7 |
Os12t0605300-01 | Rice | nucleus | 30.97 | 8.6 |
Os07t0176200-01 | Rice | nucleus | 57.52 | 8.31 |
Bra033919.1-P | Field mustard | nucleus | 54.87 | 8.29 |
CDY10669 | Canola | nucleus | 54.87 | 8.29 |
GSMUA_Achr9P25670_001 | Banana | nucleus | 60.18 | 8.2 |
KRH35487 | Soybean | nucleus | 53.98 | 8.03 |
KRH77830 | Soybean | nucleus | 54.87 | 8.01 |
KRG91344 | Soybean | nucleus | 54.87 | 8.01 |
KRH27657 | Soybean | nucleus | 53.98 | 7.88 |
VIT_05s0020g03880.t01 | Wine grape | nucleus | 53.1 | 7.86 |
VIT_14s0030g01800.t01 | Wine grape | nucleus | 53.98 | 7.57 |
PGSC0003DMT400082098 | Potato | nucleus | 53.1 | 7.26 |
Solyc09g082500.2.1 | Tomato | nucleus | 53.1 | 7.24 |
Os01t0761100-01 | Rice | cytosol, nucleus, plastid | 30.97 | 5.65 |
CDX92957 | Canola | nucleus, plastid | 52.21 | 4.85 |
CDX94892 | Canola | nucleus, plastid | 53.1 | 4.83 |
Bra001884.1-P | Field mustard | nucleus, plastid | 52.21 | 4.82 |
CDY64242 | Canola | nucleus | 6.19 | 2.65 |
Protein Annotations
EnsemblPlants:Os03t0638300-01 | EnsemblPlantsGene:Os03g0638300 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:CRC |
InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF21 | PFAM:PF03638 |
PFscan:PS51634 | ProteinID:BAH92282.1 | ProteinID:BAS85409.1 | SEG:seg | SMART:SM01114 | TMHMM:TMhelix |
UniParc:UPI0001B662CA | UniProt:C7IZN4 | MapMan:15.5.9 | : | : | : |
Description
Tesmin/TSO1-like, CXC domain containing protein. (Os03t0638300-01)
Coordinates
chr3:-:24454477..24457481
Molecular Weight (calculated)
12916.6 Da
IEP (calculated)
8.330
GRAVY (calculated)
-0.138
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: NHVEFCRQKC QNDNVDSCKR CSCKKSKCLK LYCECFASKV YCSESCSCRG CFNDHSHEET VLSTRNRIES RNPLAFAPKV IRTCGPGLEF GVRAHSFCFS
101: FLSLLLITFF FMA
101: FLSLLLITFF FMA
001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
Arabidopsis Description
TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.