Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10669 | Canola | nucleus | 93.67 | 85.03 |
| CDY34235 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.7 | 77.62 |
| AT3G22780.1 | Thale cress | nucleus | 74.52 | 72.81 |
| CDY64242 | Canola | nucleus | 23.86 | 61.36 |
| Os03t0638300-01 | Rice | cytosol | 9.28 | 55.75 |
| CDY29770 | Canola | nucleus, plastid | 50.81 | 53.32 |
| CDY42785 | Canola | nucleus, plastid | 50.52 | 52.21 |
| CDY67857 | Canola | nucleus, plastid | 46.24 | 51.99 |
| CDY10668 | Canola | nucleus, plastid | 43.74 | 51.74 |
| CDY54822 | Canola | cytosol, plastid | 41.68 | 51.55 |
| CDY64240 | Canola | cytosol, plastid | 44.33 | 50.5 |
| CDX94892 | Canola | nucleus, plastid | 73.49 | 40.21 |
| CDX92957 | Canola | nucleus, plastid | 71.28 | 39.8 |
| KRH77830 | Soybean | nucleus | 43.74 | 38.37 |
| KRH27657 | Soybean | nucleus | 43.59 | 38.24 |
| PGSC0003DMT400082098 | Potato | nucleus | 45.07 | 37.05 |
| Solyc09g082500.2.1 | Tomato | nucleus | 45.07 | 36.91 |
| KRH35487 | Soybean | nucleus | 41.09 | 36.71 |
| KRG91344 | Soybean | nucleus | 41.83 | 36.69 |
| VIT_14s0030g01800.t01 | Wine grape | nucleus | 41.24 | 34.74 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 36.97 | 34.01 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 39.91 | 33.66 |
| CDX79489 | Canola | cytosol | 15.02 | 31.58 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 38.14 | 31.24 |
| CDY44573 | Canola | cytosol | 6.48 | 30.99 |
| CDX74164 | Canola | nucleus | 22.83 | 29.69 |
| TraesCS5B01G062400.1 | Wheat | nucleus | 33.28 | 29.54 |
| Os07t0176200-01 | Rice | nucleus | 34.02 | 29.54 |
| HORVU5Hr1G012950.1 | Barley | nucleus | 33.28 | 29.5 |
| OQU88523 | Sorghum | nucleus | 33.58 | 29.38 |
| TraesCS4D01G026100.1 | Wheat | nucleus | 34.02 | 29.35 |
| Os12t0605500-01 | Rice | nucleus | 32.7 | 29.21 |
| TraesCS5D01G065300.1 | Wheat | nucleus | 32.84 | 29.15 |
| TraesCS5A01G053800.1 | Wheat | nucleus | 32.84 | 29.15 |
| CDY40681 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 23.12 | 28.91 |
| CDY71540 | Canola | nucleus, plastid | 11.19 | 28.68 |
| TraesCS4B01G028500.1 | Wheat | nucleus | 33.28 | 28.64 |
| EES17353 | Sorghum | nucleus | 32.25 | 28.55 |
| Zm00001d018930_P003 | Maize | nucleus | 33.28 | 27.36 |
| TraesCS4A01G284600.2 | Wheat | nucleus | 33.58 | 27.24 |
| CDY67603 | Canola | cytosol | 11.19 | 26.48 |
| EER93767 | Sorghum | nucleus | 28.87 | 26.24 |
| Zm00001d041445_P007 | Maize | golgi, nucleus, plasma membrane | 32.25 | 26.2 |
| Zm00001d031009_P004 | Maize | golgi, plasma membrane | 31.96 | 26.08 |
| HORVU4Hr1G004280.15 | Barley | nucleus, plastid | 33.28 | 24.49 |
| Zm00001d033274_P005 | Maize | nucleus | 26.21 | 24.25 |
| CDY20184 | Canola | cytosol | 10.46 | 20.88 |
| CDY19795 | Canola | nucleus | 13.99 | 20.88 |
| CDY28377 | Canola | nucleus | 10.01 | 20.73 |
| CDY05722 | Canola | nucleus | 14.58 | 20.0 |
| CDX80536 | Canola | nucleus | 15.17 | 19.85 |
| CDX88196 | Canola | nucleus | 14.87 | 19.8 |
| CDY31991 | Canola | nucleus | 14.73 | 19.76 |
| CDY05340 | Canola | nucleus | 13.4 | 19.04 |
| CDY65712 | Canola | nucleus | 12.37 | 18.34 |
| CDX97461 | Canola | nucleus | 15.02 | 18.02 |
| CDY66476 | Canola | nucleus | 14.87 | 17.63 |
| CDX92907 | Canola | nucleus | 14.43 | 17.56 |
| CDY35239 | Canola | nucleus | 14.73 | 17.15 |
| CDY06853 | Canola | cytosol, nucleus, plastid | 14.73 | 7.1 |
Protein Annotations
| EnsemblPlants:CDY54821 | EnsemblPlantsGene:GSBRNA2T00014688001 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF21 | PFAM:PF03638 | PFscan:PS51634 | ProteinID:CDY54821 | ProteinID:CDY54821.1 |
| SEG:seg | SMART:SM01114 | UniParc:UPI0004EC71FE | UniProt:A0A078IU52 | MapMan:15.5.9 | : |
Description
BnaCnng27630DBnaCnng27630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IU52]
Coordinates
chrLK033353:-:45148..48254
Molecular Weight (calculated)
74875.3 Da
IEP (calculated)
7.025
GRAVY (calculated)
-0.654
Length
679 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNSQKKKIE TPTPKSKFED SPVFNYINNL SPIEAVRSIP TVQTFNSLSF TSPPPVFTSP HASFHRESRF FRCHNSVERS KALESLDRSV STQEEVVVAS
101: GEVDLNKEAT LEDQEEDETS RDRVDSPGTG DIVTQVLLDP SGVAPQGEDN ASSSEDVSVG LRKILDAQKE NDTPGCRRLM ADAAELLVFR SPNDSEAFGC
201: LVDKISSSER RFCAGVKLTK RHDITKDVQA NDNQPLAVVP NQSVSNLHRG SMRRRCLDFE VLGKRKKDIA DDDQQAVGDN KAESSSKCVV PGIGLHLNAI
301: AMASRGIKIN TIHEDSATVE IQKSFLGSTT PVQSQDIMRE TLDQAENEPG KGLAVEEETP KPLVFEELNQ DSLQKKKQVR KVEEPGEGDS CKRCNCKKSK
401: CLKLYCECFA AGVYCIEPCS CVDCFNRPIH EDTVLATRKQ IESRNPLAFA PKVIRNSDSI METTDDASKT PASARHKRGC NCKKSNCLKK YCECFQSGVG
501: CSINCRCEGC KNAFGKKDAY LLAIMESKQE EDLSKVQQNP NLSKEVEQNP SSDQPSTPLP PYRHTVVHQP FLSKNRLPPT QFFLGAGSSS FRKPDGDLTQ
601: ARNEKKPLET VAEDKTEIMP EILSNTPITT IKAISPNSKR VSPPHIGSSE SGPIIGKRTN GRKLILRSIP AFPSLNPNQ
101: GEVDLNKEAT LEDQEEDETS RDRVDSPGTG DIVTQVLLDP SGVAPQGEDN ASSSEDVSVG LRKILDAQKE NDTPGCRRLM ADAAELLVFR SPNDSEAFGC
201: LVDKISSSER RFCAGVKLTK RHDITKDVQA NDNQPLAVVP NQSVSNLHRG SMRRRCLDFE VLGKRKKDIA DDDQQAVGDN KAESSSKCVV PGIGLHLNAI
301: AMASRGIKIN TIHEDSATVE IQKSFLGSTT PVQSQDIMRE TLDQAENEPG KGLAVEEETP KPLVFEELNQ DSLQKKKQVR KVEEPGEGDS CKRCNCKKSK
401: CLKLYCECFA AGVYCIEPCS CVDCFNRPIH EDTVLATRKQ IESRNPLAFA PKVIRNSDSI METTDDASKT PASARHKRGC NCKKSNCLKK YCECFQSGVG
501: CSINCRCEGC KNAFGKKDAY LLAIMESKQE EDLSKVQQNP NLSKEVEQNP SSDQPSTPLP PYRHTVVHQP FLSKNRLPPT QFFLGAGSSS FRKPDGDLTQ
601: ARNEKKPLET VAEDKTEIMP EILSNTPITT IKAISPNSKR VSPPHIGSSE SGPIIGKRTN GRKLILRSIP AFPSLNPNQ
001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
Arabidopsis Description
TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.