Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025590.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY71540 | Canola | nucleus, plastid | 73.94 | 39.62 |
| CDY67603 | Canola | cytosol | 72.54 | 35.89 |
| CDY05722 | Canola | nucleus | 70.42 | 20.2 |
| CDY31991 | Canola | nucleus | 70.42 | 19.76 |
| CDY35239 | Canola | nucleus | 79.58 | 19.38 |
| CDX97461 | Canola | nucleus | 75.35 | 18.9 |
| CDY66476 | Canola | nucleus | 75.35 | 18.67 |
| CDX92907 | Canola | nucleus | 73.24 | 18.64 |
| GSMUA_Achr9P06330_001 | Banana | cytosol | 59.86 | 16.8 |
| GSMUA_Achr2P09150_001 | Banana | cytosol | 61.27 | 16.67 |
| CDY65712 | Canola | nucleus | 53.52 | 16.59 |
| CDX88196 | Canola | nucleus | 58.45 | 16.27 |
| CDX80536 | Canola | nucleus | 57.75 | 15.8 |
| CDY19795 | Canola | nucleus | 50.0 | 15.6 |
| GSMUA_Achr6P26760_001 | Banana | nucleus | 59.86 | 15.26 |
| GSMUA_Achr3P31550_001 | Banana | nucleus | 62.68 | 15.21 |
| CDY34235 | Canola | endoplasmic reticulum, extracellular, vacuole | 30.28 | 15.04 |
| CDY28377 | Canola | nucleus | 33.1 | 14.33 |
| Os01t0761100-01 | Rice | cytosol, nucleus, plastid | 61.97 | 14.22 |
| Zm00001d043378_P001 | Maize | nucleus | 59.86 | 13.91 |
| KXG33424 | Sorghum | nucleus | 59.86 | 13.87 |
| Zm00001d012688_P001 | Maize | nucleus | 59.86 | 13.84 |
| TraesCS3A01G304800.1 | Wheat | plastid | 59.15 | 13.66 |
| HORVU3Hr1G073470.1 | Barley | cytosol, nucleus, plastid | 58.45 | 13.56 |
| TraesCS3B01G331700.1 | Wheat | plastid | 58.45 | 13.5 |
| TraesCS3D01G297000.1 | Wheat | plastid | 58.45 | 13.5 |
| CDY20184 | Canola | cytosol | 31.69 | 13.24 |
| CDY05340 | Canola | nucleus | 41.55 | 12.34 |
| CDX79489 | Canola | cytosol | 23.94 | 10.53 |
| CDY64242 | Canola | nucleus | 16.2 | 8.71 |
| CDY06853 | Canola | cytosol, nucleus, plastid | 79.58 | 8.03 |
| CDY54822 | Canola | cytosol, plastid | 30.99 | 8.01 |
| CDX74164 | Canola | nucleus | 28.17 | 7.66 |
| CDY64240 | Canola | cytosol, plastid | 31.69 | 7.55 |
| CDY10668 | Canola | nucleus, plastid | 30.28 | 7.49 |
| CDY67857 | Canola | nucleus, plastid | 31.69 | 7.45 |
| CDY40681 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 28.17 | 7.37 |
| CDY29770 | Canola | nucleus, plastid | 31.69 | 6.96 |
| CDY42785 | Canola | nucleus, plastid | 31.69 | 6.85 |
| CDY54821 | Canola | nucleus | 30.99 | 6.48 |
| CDY10669 | Canola | nucleus | 30.99 | 5.88 |
| CDX92957 | Canola | nucleus, plastid | 32.39 | 3.78 |
| CDX94892 | Canola | nucleus, plastid | 30.28 | 3.46 |
Protein Annotations
| EnsemblPlants:CDY44573 | EnsemblPlantsGene:GSBRNA2T00080490001 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 | ProteinID:CDY44573 | ProteinID:CDY44573.1 |
| SMART:SM01114 | UniParc:UPI0002544D24 | UniProt:A0A078I642 | MapMan:15.5.9 | : | : |
Description
BnaA04g10170DBnaA04g10170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I642]
Coordinates
chrLK032595:-:41495..42112
Molecular Weight (calculated)
15872.5 Da
IEP (calculated)
6.492
GRAVY (calculated)
-0.585
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLIGFVSGT YCDGWNCVNC FNKVDNEPAR RDAAETTMER NPNAFSPKKL LAEEIGKVVL LGKHNKGCHC KKSGYFKKYC ECFQANNLCS ENWDCKNFEG
101: SEERQALFHG EHANNIAYLH QEANAAIHEA VGSSGFSLSP EP
101: SEERQALFHG EHANNIAYLH QEANAAIHEA VGSSGFSLSP EP
001: MGEGEEGDKF PPKTDEVTQE SMKSARQLDF TGGSSDVEHS HSNQASSMAA ASIPSPIVTV TRPIITSQAP PTVATPIPPP PQSQGIILHV PIRHPRPESP
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT ANGVSQTAKQ PSQLTTTTTT PNTSSQTHLH KTPALSEKKD L
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT ANGVSQTAKQ PSQLTTTTTT PNTSSQTHLH KTPALSEKKD L
Arabidopsis Description
Tesmin/TSO1-like CXC domain-containing protein [Source:TAIR;Acc:AT2G20110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.