Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012688_P001 | Maize | nucleus | 91.19 | 91.04 |
| Zm00001d043378_P001 | Maize | nucleus | 86.79 | 87.07 |
| Os01t0761100-01 | Rice | cytosol, nucleus, plastid | 76.84 | 76.09 |
| TraesCS3D01G297000.1 | Wheat | plastid | 73.74 | 73.5 |
| TraesCS3A01G304800.1 | Wheat | plastid | 73.57 | 73.33 |
| TraesCS3B01G331700.1 | Wheat | plastid | 73.41 | 73.17 |
| HORVU3Hr1G073470.1 | Barley | cytosol, nucleus, plastid | 72.1 | 72.22 |
| CDY44573 | Canola | cytosol | 13.87 | 59.86 |
| Bra025590.1-P | Field mustard | cytosol | 13.87 | 59.86 |
| GSMUA_Achr9P06330_001 | Banana | cytosol | 41.6 | 50.4 |
| GSMUA_Achr2P09150_001 | Banana | cytosol | 42.09 | 49.43 |
| GSMUA_Achr6P26760_001 | Banana | nucleus | 43.39 | 47.76 |
| PGSC0003DMT400000824 | Potato | plastid | 37.68 | 47.34 |
| Solyc12g007180.1.1 | Tomato | nucleus | 36.87 | 45.38 |
| VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 38.66 | 45.23 |
| KRH41552 | Soybean | nucleus | 40.62 | 45.19 |
| KRH48373 | Soybean | nucleus | 41.27 | 45.02 |
| KRH39300 | Soybean | nucleus | 40.78 | 44.72 |
| KRH60264 | Soybean | nucleus | 40.29 | 44.03 |
| GSMUA_Achr3P31550_001 | Banana | nucleus | 40.95 | 42.91 |
| AT4G29000.1 | Thale cress | nucleus | 39.97 | 40.63 |
| AT2G20110.2 | Thale cress | nucleus | 38.01 | 40.31 |
| EER89807 | Sorghum | cytosol | 30.67 | 36.94 |
| KXG30022 | Sorghum | nucleus, plastid | 28.39 | 32.04 |
| EES17352 | Sorghum | nucleus | 11.75 | 17.6 |
| EES19781 | Sorghum | cytosol | 9.79 | 16.71 |
| OQU88523 | Sorghum | nucleus | 15.66 | 12.37 |
| EES17353 | Sorghum | nucleus | 15.01 | 11.99 |
| EER93767 | Sorghum | nucleus | 14.19 | 11.65 |
Protein Annotations
| EnsemblPlants:KXG33424 | EnsemblPlantsGene:SORBI_3003G303800 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 | ProteinID:KXG33424 | ProteinID:KXG33424.1 |
| SEG:seg | SMART:SM01114 | UniParc:UPI00081AB73A | UniProt:A0A1B6Q675 | MapMan:15.5.9 | : |
Description
hypothetical protein
Coordinates
chr3:-:63405962..63412274
Molecular Weight (calculated)
67300.9 Da
IEP (calculated)
8.582
GRAVY (calculated)
-0.747
Length
613 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGKEQGGPP PPQRPPVPAA SMQPPIKKLV RQLDFNSAAL AGNPAMAAAA AAVSRALQPR ALPVGFQHPQ HVRAAMPMGM PQQLHQRILP VMRPHQVVGH
101: VPLPRHAVPM AVPVPQLRPM PPQPVQRPPV AVPLKPESPK PRARLYEGKD STPTKKKCCN CRNSRCLKLY CECFASGTHC DGCNCTNCFN NPENEVARRE
201: AIEATLERNP DAFRPKIGSS PHTNRNNEVS SDLPLVGKHN KGCHCKKSGC LKKYCECFQA NILCSENCKC MDCKNFEGSE ERRNLFQGDH KNAINMQQAT
301: NAAVNGAIGA TGFPSPSTSR KRKHIDPSLD NSNKEHVAHR NYHISQKNAV PDGPIPISQS AHPPNLGPFK VTYRPLLADI VQEEDIKELC KLLVVVSGEA
401: AKTYAGRKTM EERVGEKEDE RGGQKEDDRA GSLALTNHDR EGNNQDPDQK ASIDDHSSRG THTGKAILEE SRPNCADDQK SNRPMSPGTL ALLCDEEVKM
501: CDEQDTVFTT SQNAVPQQTI TVNQNQSALY AEQERVVLTE FRDCLRKFVE RGRNKERRYS SMAIESETSA NPGQVNGVSQ VPYSKVDVPV VKTYPQSSSS
601: NAGKPVTGFL DKN
101: VPLPRHAVPM AVPVPQLRPM PPQPVQRPPV AVPLKPESPK PRARLYEGKD STPTKKKCCN CRNSRCLKLY CECFASGTHC DGCNCTNCFN NPENEVARRE
201: AIEATLERNP DAFRPKIGSS PHTNRNNEVS SDLPLVGKHN KGCHCKKSGC LKKYCECFQA NILCSENCKC MDCKNFEGSE ERRNLFQGDH KNAINMQQAT
301: NAAVNGAIGA TGFPSPSTSR KRKHIDPSLD NSNKEHVAHR NYHISQKNAV PDGPIPISQS AHPPNLGPFK VTYRPLLADI VQEEDIKELC KLLVVVSGEA
401: AKTYAGRKTM EERVGEKEDE RGGQKEDDRA GSLALTNHDR EGNNQDPDQK ASIDDHSSRG THTGKAILEE SRPNCADDQK SNRPMSPGTL ALLCDEEVKM
501: CDEQDTVFTT SQNAVPQQTI TVNQNQSALY AEQERVVLTE FRDCLRKFVE RGRNKERRYS SMAIESETSA NPGQVNGVSQ VPYSKVDVPV VKTYPQSSSS
601: NAGKPVTGFL DKN
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.