Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG33424 | Sorghum | nucleus | 76.09 | 76.84 |
| TraesCS3A01G304800.1 | Wheat | plastid | 75.44 | 75.94 |
| TraesCS3D01G297000.1 | Wheat | plastid | 75.44 | 75.94 |
| TraesCS3B01G331700.1 | Wheat | plastid | 75.28 | 75.77 |
| Zm00001d012688_P001 | Maize | nucleus | 75.12 | 75.73 |
| HORVU3Hr1G073470.1 | Barley | cytosol, nucleus, plastid | 74.64 | 75.49 |
| Zm00001d043378_P001 | Maize | nucleus | 71.41 | 72.34 |
| Bra025590.1-P | Field mustard | cytosol | 14.22 | 61.97 |
| CDY44573 | Canola | cytosol | 14.22 | 61.97 |
| GSMUA_Achr9P06330_001 | Banana | cytosol | 44.43 | 54.35 |
| GSMUA_Achr2P09150_001 | Banana | cytosol | 43.78 | 51.92 |
| GSMUA_Achr6P26760_001 | Banana | nucleus | 45.88 | 50.99 |
| PGSC0003DMT400000824 | Potato | plastid | 39.74 | 50.41 |
| Solyc12g007180.1.1 | Tomato | nucleus | 38.93 | 48.39 |
| KRH41552 | Soybean | nucleus | 42.97 | 48.28 |
| VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 40.71 | 48.09 |
| KRH39300 | Soybean | nucleus | 43.3 | 47.94 |
| KRH60264 | Soybean | nucleus | 43.3 | 47.77 |
| KRH48373 | Soybean | nucleus | 43.3 | 47.69 |
| GSMUA_Achr3P31550_001 | Banana | nucleus | 43.62 | 46.15 |
| Os06t0332700-00 | Rice | nucleus | 21.49 | 43.89 |
| AT4G29000.1 | Thale cress | nucleus | 42.65 | 43.78 |
| AT2G20110.2 | Thale cress | nucleus | 38.61 | 41.35 |
| Os02t0274600-00 | Rice | cytosol, nucleus | 26.17 | 37.07 |
| Os03t0638300-01 | Rice | cytosol | 5.65 | 30.97 |
| Os08t0363900-00 | Rice | cytosol | 17.12 | 29.86 |
| Os08t0369600-01 | Rice | cytosol, nucleus, peroxisome | 17.77 | 29.81 |
| Os05t0509400-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 11.15 | 18.45 |
| Os12t0605300-01 | Rice | nucleus | 11.47 | 17.44 |
| Os12t0605500-01 | Rice | nucleus | 15.99 | 13.03 |
| Os07t0176200-01 | Rice | nucleus | 16.32 | 12.92 |
Protein Annotations
| EMBL:AK122112 | EnsemblPlants:Os01t0761100-01 | EnsemblPlantsGene:Os01g0761100 | EntrezGene:4327019 | InterPro:CRC | InterPro:IPR005172 |
| InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 |
| ProteinID:BAD87346.1 | ProteinID:BAF06235.1 | ProteinID:BAS74455.1 | RefSeq:XP_015621699.1 | SEG:seg | SMART:SM01114 |
| UniParc:UPI00004C294D | UniProt:Q5JMF9 | MapMan:15.5.9 | : | : | : |
Description
Tesmin/TSO1-like, CXC domain containing protein. (Os01t0761100-01)
Coordinates
chr1:-:32016706..32022401
Molecular Weight (calculated)
66776.6 Da
IEP (calculated)
8.982
GRAVY (calculated)
-0.673
Length
619 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGKEQQGGG GPPPPPRAPV PAASSQPPIK KLVRQLDFTS AALAGNPAMA AAAAAVSRAL QPRAVPVGFP QPQQLRAHLP VGVPQQLHPR GLPVMRSHHV
101: VHVPLPRPAV AVAVPVPQVR PAQPQPVPRP PVAVPLKPES PKPPRARLYE GKDGTPTKKK CCNCKHSKCL KLYCECFASG VYCDGCNCSN CFNNVKNETA
201: RREAIDATLE RNPDAFRPKI GSSPHANRNN MEAAGDLPLV GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCMDCKNF EGSEERKALF QGDHKNSIHM
301: QQAANAAVNG AIGAAAFSSP SASRKRKHID PSLDHSAKEN GAHRTNHVPQ KNGMPSDGPL PINQPVHPPT LGPFKVTYRP LLADIVQPGD VKELCKLLVV
401: VSGNAAKAYA GKKSQDKVVE KEDEMGGKRE GEIGGSLAST NHDREENNND PNNQKASADD PSTGGTRAGK ASLEESKHDC NDDQKSNRPM SPGTLALMCD
501: EQDTMFMTSQ NVVPQQPAPV NQNQSELYAE QERCVLTEFR DCLHKLVTFG RMKEEKFSMA IKSEVPAHPM QANGVSRIPY SKEVDVPVVK TFLQSSSRHP
601: AAGNSATGHL DKKPKHENT
101: VHVPLPRPAV AVAVPVPQVR PAQPQPVPRP PVAVPLKPES PKPPRARLYE GKDGTPTKKK CCNCKHSKCL KLYCECFASG VYCDGCNCSN CFNNVKNETA
201: RREAIDATLE RNPDAFRPKI GSSPHANRNN MEAAGDLPLV GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCMDCKNF EGSEERKALF QGDHKNSIHM
301: QQAANAAVNG AIGAAAFSSP SASRKRKHID PSLDHSAKEN GAHRTNHVPQ KNGMPSDGPL PINQPVHPPT LGPFKVTYRP LLADIVQPGD VKELCKLLVV
401: VSGNAAKAYA GKKSQDKVVE KEDEMGGKRE GEIGGSLAST NHDREENNND PNNQKASADD PSTGGTRAGK ASLEESKHDC NDDQKSNRPM SPGTLALMCD
501: EQDTMFMTSQ NVVPQQPAPV NQNQSELYAE QERCVLTEFR DCLHKLVTFG RMKEEKFSMA IKSEVPAHPM QANGVSRIPY SKEVDVPVVK TFLQSSSRHP
601: AAGNSATGHL DKKPKHENT
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.