Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G065500.1 | Wheat | nucleus, plastid | 67.81 | 76.88 |
| TraesCS5A01G054200.1 | Wheat | nucleus, plastid | 67.32 | 76.75 |
| TraesCS5B01G062200.1 | Wheat | nucleus, plastid | 67.57 | 76.39 |
| Zm00001d031008_P001 | Maize | nucleus | 68.8 | 71.07 |
| HORVU5Hr1G013160.11 | Barley | nucleus, plastid | 70.27 | 69.93 |
| EES17352 | Sorghum | nucleus | 69.04 | 68.7 |
| Zm00001d041444_P002 | Maize | nucleus | 65.11 | 67.26 |
| Os05t0509400-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 36.85 | 40.11 |
| Os03t0638300-01 | Rice | cytosol | 8.6 | 30.97 |
| Os06t0332700-00 | Rice | nucleus | 16.71 | 22.44 |
| CDX79489 | Canola | cytosol | 14.0 | 17.65 |
| Os12t0605500-01 | Rice | nucleus | 27.52 | 14.74 |
| Os08t0369600-01 | Rice | cytosol, nucleus, peroxisome | 13.27 | 14.63 |
| Os08t0363900-00 | Rice | cytosol | 12.53 | 14.37 |
| Os02t0274600-00 | Rice | cytosol, nucleus | 15.23 | 14.19 |
| Os07t0176200-01 | Rice | nucleus | 24.82 | 12.92 |
| Bra001128.1-P | Field mustard | nucleus | 15.72 | 12.28 |
| CDX74164 | Canola | nucleus | 15.72 | 12.26 |
| CDY40681 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 15.72 | 11.79 |
| AT3G04850.1 | Thale cress | cytosol | 18.43 | 11.74 |
| Os01t0761100-01 | Rice | cytosol, nucleus, plastid | 17.44 | 11.47 |
Protein Annotations
| EnsemblPlants:Os12t0605300-01 | EnsemblPlantsGene:Os12g0605300 | EntrezGene:4352738 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam |
| InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF44 | PFAM:PF03638 | PFscan:PS51634 | ProteinID:ABA99826.1 |
| ProteinID:BAF30242.1 | ProteinID:BAT17981.1 | RefSeq:XP_015618281.1 | SEG:seg | SMART:SM01114 | SUPFAM:SSF101447 |
| UniParc:UPI0000680C8B | UniProt:Q2QMG8 | MapMan:15.5.9 | : | : | : |
Description
Tesmin/TSO1-like, CXC domain containing protein. (Os12t0605300-01)
Coordinates
chr12:-:25553547..25557389
Molecular Weight (calculated)
44431.7 Da
IEP (calculated)
6.493
GRAVY (calculated)
-0.631
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAEDPAKP PPPPPPQLEA SGSDPDDPLL RDRVVVIAPP PPPPPPPPPP APAPALLAPA ENASAEAAFA VPPAAIAAVV EANGNSEKKK KRKTDEGEGC
101: KSCSCKKSKC LKLYCVCFAS GSHCSESCGC DPCYNKSIHG VPRSTPALPL KAVQTLETGQ DSVEQLIRSP MDFGRRKCTC KKSGCLKKYC DCYQGGAGCS
201: INCKCDDCKN PYGRKVGVIL DGKNILAGPT PNERNGTEAD SSDDEEDDYY MNRPLSPVSP SPVSRESSFQ QETLVGVEVQ TMNGHLYPKP LTQVRPESWQ
301: LTRRPTEEVR GEAWHYLRRP SEDGTSDVME GHADPKFQRD NKQLENHVDR YSIPRCIEVM NAMADLSPIE KSLAPDVFLD PSNREIFLSL TVDIRTMWLK
401: RKMKSLV
101: KSCSCKKSKC LKLYCVCFAS GSHCSESCGC DPCYNKSIHG VPRSTPALPL KAVQTLETGQ DSVEQLIRSP MDFGRRKCTC KKSGCLKKYC DCYQGGAGCS
201: INCKCDDCKN PYGRKVGVIL DGKNILAGPT PNERNGTEAD SSDDEEDDYY MNRPLSPVSP SPVSRESSFQ QETLVGVEVQ TMNGHLYPKP LTQVRPESWQ
301: LTRRPTEEVR GEAWHYLRRP SEDGTSDVME GHADPKFQRD NKQLENHVDR YSIPRCIEVM NAMADLSPIE KSLAPDVFLD PSNREIFLSL TVDIRTMWLK
401: RKMKSLV
001: MQDSPVFNYI NSLSPIRPVR SIPNPNQFSS LNFTSPPSVF TSPHLTSSHK ESRFFKTHNS SSSDPTNSVE SQEDESTSHE EVPAEGEDTK GLNIDDCMRE
101: EASVETNLDD SVASPCGGNT TDLSLVPYAP TRGEDGSCED NGMELQKMHD NVQGKTETPD WESLIADASE LLIFDSPDAS EAFRCFMMQR ASNSEARFRN
201: GVEKQTMQHD SNKEPESANA IPYEAVSLLH RGIRRRCLDF EMPGNKQTSS ENNTAACESS SRCVVPSIGL HLNAILMSSK DCKTNVTQDY SCSANIQVGL
301: QRSISTLQDS LDQTENEIRE DADQDVPVEP ALQELNLSSP KKKRVKLDSG EGESCKRCNC KKSKCLKLYC ECFAAGVYCI EPCSCIDCFN KPIHEDVVLA
401: TRKQIESRNP LAFAPKVIRN SDSVQETGDD ASKTPASARH KRGCNCKKSN CLKKYCECYQ GGVGCSINCR CEGCKNAFGR KDGSSIDMEA EQEEENETSE
501: KSRTAKSQQN TEVLMRKDMS SALPTTPTPI YRPELVQLPF SSSKNRMPPP QSLLGGGSSS GIFNSQYLRK PDISLSQSRI EKSFETVAVD GAEQMPEILI
601: HSPIPNIKSV SPNGKRVSPP HMESSSSGSI LGRRNGGRKL ILQSIPSFPS LTPQH
101: EASVETNLDD SVASPCGGNT TDLSLVPYAP TRGEDGSCED NGMELQKMHD NVQGKTETPD WESLIADASE LLIFDSPDAS EAFRCFMMQR ASNSEARFRN
201: GVEKQTMQHD SNKEPESANA IPYEAVSLLH RGIRRRCLDF EMPGNKQTSS ENNTAACESS SRCVVPSIGL HLNAILMSSK DCKTNVTQDY SCSANIQVGL
301: QRSISTLQDS LDQTENEIRE DADQDVPVEP ALQELNLSSP KKKRVKLDSG EGESCKRCNC KKSKCLKLYC ECFAAGVYCI EPCSCIDCFN KPIHEDVVLA
401: TRKQIESRNP LAFAPKVIRN SDSVQETGDD ASKTPASARH KRGCNCKKSN CLKKYCECYQ GGVGCSINCR CEGCKNAFGR KDGSSIDMEA EQEEENETSE
501: KSRTAKSQQN TEVLMRKDMS SALPTTPTPI YRPELVQLPF SSSKNRMPPP QSLLGGGSSS GIFNSQYLRK PDISLSQSRI EKSFETVAVD GAEQMPEILI
601: HSPIPNIKSV SPNGKRVSPP HMESSSSGSI LGRRNGGRKL ILQSIPSFPS LTPQH
Arabidopsis Description
TCX2Protein tesmin/TSO1-like CXC 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JIF5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.