Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031008_P001 | Maize | nucleus | 81.73 | 81.73 |
| EES17352 | Sorghum | nucleus | 82.49 | 79.46 |
| TraesCS5D01G065500.1 | Wheat | nucleus, plastid | 62.69 | 68.8 |
| TraesCS5A01G054200.1 | Wheat | nucleus, plastid | 61.93 | 68.35 |
| TraesCS5B01G062200.1 | Wheat | nucleus, plastid | 62.44 | 68.33 |
| Os12t0605300-01 | Rice | nucleus | 67.26 | 65.11 |
| HORVU5Hr1G013160.11 | Barley | nucleus, plastid | 60.91 | 58.68 |
| Zm00001d038660_P003 | Maize | nucleus | 35.03 | 38.33 |
| Zm00001d010713_P006 | Maize | cytosol | 28.68 | 30.96 |
| CDX79489 | Canola | cytosol | 13.45 | 16.41 |
| Bra001128.1-P | Field mustard | nucleus | 16.5 | 12.48 |
| CDX74164 | Canola | nucleus | 16.5 | 12.45 |
| Zm00001d037461_P001 | Maize | cytosol | 15.74 | 12.13 |
| Zm00001d015990_P001 | Maize | nucleus | 16.24 | 12.08 |
| Zm00001d031009_P004 | Maize | golgi, plasma membrane | 24.87 | 11.78 |
| Zm00001d041445_P007 | Maize | golgi, nucleus, plasma membrane | 24.87 | 11.72 |
| AT3G04850.1 | Thale cress | cytosol | 18.53 | 11.42 |
| CDY40681 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 15.74 | 11.42 |
| Zm00001d012688_P001 | Maize | nucleus | 17.77 | 11.4 |
| Zm00001d033274_P005 | Maize | nucleus | 21.07 | 11.31 |
| Zm00001d018930_P003 | Maize | nucleus | 23.6 | 11.26 |
| Zm00001d043378_P001 | Maize | nucleus | 16.5 | 10.64 |
Protein Annotations
| EMBL:BT038265 | EMBL:BT043316 | EnsemblPlants:Zm00001d041444_P002 | EnsemblPlants:Zm00001d041444_T002 | EnsemblPlantsGene:Zm00001d041444 | EntrezGene:100217281 |
| InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF44 |
| PFAM:PF03638 | PFscan:PS51634 | ProteinID:ONM33043.1 | ProteinID:ONM33044.1 | SEG:seg | SMART:SM01114 |
| UniParc:UPI00017B6CAE | UniProt:B4FMC7 | MapMan:15.5.9 | : | : | : |
Description
CPP-transcription factor 13Protein tesmin/TSO1-like CXC 4
Coordinates
chr3:-:120186769..120190340
Molecular Weight (calculated)
42462.1 Da
IEP (calculated)
6.963
GRAVY (calculated)
-0.598
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MDADVGAGAT NQPWPEPDDA HLSPPPPPPP PPASAPTPAA EAAAPTASAA VSPPAPAEAN GNSDRKRRRK ADDGDGCKAC SCKKSRCLKL YCVCYASGSH
101: CTELCGCEPC HNKPPQGAPW TAPVLPLKPV QTLEAGQEIV EQLIRSPMDL IRRKCTCKKS GCLKKYCDCY QGGAGCSINC KCDDCRNPFG RKVGVILDGK
201: SSGLPAPVHV HERNGTEADS SGDDEEDDDL YMNRQLSPSP VSRESSFQQE TLVGVEVQTM NGHLYPKPLT QVRPEPSSWQ LSAARRPAEE PRGEVWRFSG
301: RPGEDGASDA VEAARAVAVA PPRESRRPGT RGGDRLRFSI PRCVEAMSAM AELSPVEKSL APDVFLDESN REIFLSLSVD VRPIWLRRKM KSLV
101: CTELCGCEPC HNKPPQGAPW TAPVLPLKPV QTLEAGQEIV EQLIRSPMDL IRRKCTCKKS GCLKKYCDCY QGGAGCSINC KCDDCRNPFG RKVGVILDGK
201: SSGLPAPVHV HERNGTEADS SGDDEEDDDL YMNRQLSPSP VSRESSFQQE TLVGVEVQTM NGHLYPKPLT QVRPEPSSWQ LSAARRPAEE PRGEVWRFSG
301: RPGEDGASDA VEAARAVAVA PPRESRRPGT RGGDRLRFSI PRCVEAMSAM AELSPVEKSL APDVFLDESN REIFLSLSVD VRPIWLRRKM KSLV
001: MDSPVFNYIN SLSPIRPVRS IPNPNQFSSL NFTSPPSVFT SPHLTSSHKE SRFFKTHNSS SSDPTNSVES QEDESTSHEE VPAEGEDTKG LNIDDCMREE
101: ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE AFRCFMMQRA SNSEARFRNG
201: VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD CKTNVTQDYS CSANIQVGLQ
301: RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE PCSCIDCFNK PIHEDVVLAT
401: RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK DGSSIDMEAE QEEENETSEK
501: SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE KSFETVAVDG AEQMPEILIH
601: SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
101: ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE AFRCFMMQRA SNSEARFRNG
201: VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD CKTNVTQDYS CSANIQVGLQ
301: RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE PCSCIDCFNK PIHEDVVLAT
401: RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK DGSSIDMEAE QEEENETSEK
501: SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE KSFETVAVDG AEQMPEILIH
601: SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
Arabidopsis Description
TCX2Protein tesmin/TSO1-like CXC 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JIF5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.