Factsheet for Zm00001d031009_P004

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 4
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17353	Sorghum	nucleus	82.69	89.7
Zm00001d041445_P007	Maize	golgi, nucleus, plasma membrane	84.38	83.97
TraesCS5A01G053800.1	Wheat	nucleus	61.42	66.8
TraesCS5D01G065300.1	Wheat	nucleus	61.06	66.41
TraesCS5B01G062400.1	Wheat	nucleus	60.94	66.27
Os12t0605500-01	Rice	nucleus	60.1	65.79
HORVU5Hr1G012950.1	Barley	nucleus	60.22	65.4
CDY34235	Canola	endoplasmic reticulum, extracellular, vacuole	15.14	44.06
Zm00001d033274_P005	Maize	nucleus	32.81	37.19
CDY64240	Canola	cytosol, plastid	26.44	36.91
GSMUA_Achr9P10600_001	Banana	nucleus	32.57	36.72
CDY54822	Canola	cytosol, plastid	24.04	36.43
CDY67857	Canola	nucleus, plastid	26.32	36.26
Bra023810.1-P	Field mustard	nucleus, plastid	25.48	35.81
CDY10668	Canola	nucleus, plastid	24.4	35.37
CDY64242	Canola	nucleus	11.18	35.23
Bra033920.1-P	Field mustard	plastid	24.16	34.96
GSMUA_Achr8P20460_001	Banana	nucleus	33.53	34.66
GSMUA_Achr9P25670_001	Banana	nucleus	34.5	34.62
CDY29770	Canola	nucleus, plastid	26.68	34.31
Bra036900.1-P	Field mustard	nucleus, plastid	26.56	34.26
AT4G14770.1	Thale cress	nucleus	27.64	34.12
VIT_05s0020g03880.t01	Wine grape	nucleus	30.77	33.55
AT3G22760.1	Thale cress	nucleus	24.52	33.5
CDY42785	Canola	nucleus, plastid	26.44	33.49
KRH27657	Soybean	nucleus	30.17	32.43
KRH77830	Soybean	nucleus	30.17	32.43
KRG91344	Soybean	nucleus	29.93	32.17
KRH35487	Soybean	nucleus	29.33	32.11
CDY54821	Canola	nucleus	26.08	31.96
Zm00001d018930_P003	Maize	nucleus	31.61	31.84
AT3G22780.1	Thale cress	nucleus	25.96	31.08
VIT_14s0030g01800.t01	Wine grape	nucleus	29.57	30.52
Bra033919.1-P	Field mustard	nucleus	25.84	28.74
CDY10669	Canola	nucleus	25.6	28.48
Solyc09g082500.2.1	Tomato	nucleus	28.0	28.11
PGSC0003DMT400082098	Potato	nucleus	27.88	28.09
Zm00001d038660_P003	Maize	nucleus	11.18	25.83
Zm00001d031008_P001	Maize	nucleus	12.02	25.38
Zm00001d041444_P002	Maize	nucleus	11.78	24.87
Zm00001d010713_P006	Maize	cytosol	8.65	19.73
CDX92957	Canola	nucleus, plastid	26.2	17.93
CDX94892	Canola	nucleus, plastid	26.44	17.73
Bra001884.1-P	Field mustard	nucleus, plastid	25.84	17.58
Zm00001d037461_P001	Maize	cytosol	9.74	15.85
Zm00001d043378_P001	Maize	nucleus	10.82	14.73
Zm00001d012688_P001	Maize	nucleus	10.82	14.66
Zm00001d015990_P001	Maize	nucleus	9.25	14.53

Protein Annotations

EnsemblPlants:Zm00001d031009_P004	EnsemblPlants:Zm00001d031009_T004	EnsemblPlantsGene:Zm00001d031009	EntrezGene:100384542	InterPro:CRC	InterPro:IPR005172
InterPro:Lin-54_fam	InterPro:Tesmin/TSO1-like_CXC	ncoils:Coil	PANTHER:PTHR12446	PANTHER:PTHR12446:SF21	PFAM:PF03638
PFscan:PS51634	ProteinID:ONM01964.1	SEG:seg	SMART:SM01114	UniParc:UPI000842CB02	UniProt:A0A1D6KFV0
MapMan:15.5.9	:	:	:	:	:

Description

CPP-transcription factor 5Protein tesmin/TSO1-like CXC 2

Coordinates

chr1:-:173165502..173189803

Molecular Weight (calculated)

90262.9 Da

IEP (calculated)

7.269

GRAVY (calculated)

-0.476

Length

832 amino acids

Sequence
(BLAST)

001: MCVCSLKWVG VKVGVIRAFA DFLLTEDCGN LYLLKKAHGF DLANPQLIDI RAHKLAFILS DEMKTCAFTF LIRFYCLQDS PVFNFINNLS PIPPPKPLDS
101: AHNVQLFKSS DLAPVSSIFA SPHVNPVKET KVLIRDESVH LPQELHSPSS VRTRIDTSGS FRMIRCKDIV SDNCNITCQL NEASIDSSDH TSNSTGQLTQ
201: SIQDAAGSME SDKDQCDANK TDLTISQECT GLEGMNLDES GPDKMDSSHS GIVVHENQLS EQNNDEPAAY NEGYIITHQS TSDMLTLAIP SGTETQPVND
301: TQMADNPYSC ESLLDDQSSG YCTQNSVHEP HLYWTGAVEG SAVSYTPQTL PGALQSQLMP CNKLSEPKDY VPTEQNALSQ HLRGMRRRSL FNEKAGISNK
401: GVDKTSDHHP VNSTTPKCKT ISGDNSKPLR TPPCALPGIG LHLNALATIP KEKIVPREIQ STINESSNLI GPAGSSPAPF EQNIINDDFT QTTDVATAEA
501: SSQGSPKKKR HKFDNGDGTS CKRCSCKKSK CLKLYCECFA AGVYCSEPCS CIGCQNNQSH METVLSTRQQ IESRNPLAFA PKVIHTSEPG MDLGDFSNKT
601: PASARHKRGC NCKKSSCLKK YCECFQGGVG CSVSCRCEGC KNAFGKREGA SVLGIGEPKQ GLEEKYVCVK EEKSEIDKQL VVYQTTDAAP AENVLTTPSM
701: VECRPLACLP PASSKKSSKK PRSSTKLTGH PSRPCNLQAP PKTDVVLSPF ENYAEMVLGD STSDILKGNS SPHTSVKVVS PNKKRISPPR MGIGLSPICR
801: SGRKLILKSI PSFPSLGGDV NNEDPKAKLP AP

Best Arabidopsis Sequence Match ( AT3G22780.1 )
(BLAST)

001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ

Arabidopsis Description

TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.