Factsheet for Zm00001d031008_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17352	Sorghum	nucleus	90.36	87.04
Zm00001d041444_P002	Maize	nucleus	81.73	81.73
TraesCS5D01G065500.1	Wheat	nucleus, plastid	64.72	71.03
TraesCS5B01G062200.1	Wheat	nucleus, plastid	64.47	70.56
TraesCS5A01G054200.1	Wheat	nucleus, plastid	63.71	70.31
Os12t0605300-01	Rice	nucleus	71.07	68.8
HORVU5Hr1G013160.11	Barley	nucleus, plastid	65.74	63.33
Zm00001d038660_P003	Maize	nucleus	37.06	40.56
Zm00001d010713_P006	Maize	cytosol	30.46	32.88
CDX79489	Canola	cytosol	13.71	16.72
Bra001128.1-P	Field mustard	nucleus	17.77	13.44
CDX74164	Canola	nucleus	17.77	13.41
Zm00001d037461_P001	Maize	cytosol	16.24	12.52
CDY40681	Canola	mitochondrion, plasma membrane, plastid, vacuole	17.01	12.34
Zm00001d015990_P001	Maize	nucleus	16.5	12.26
AT3G04850.1	Thale cress	cytosol	19.8	12.21
Zm00001d041445_P007	Maize	golgi, nucleus, plasma membrane	25.63	12.08
Zm00001d031009_P004	Maize	golgi, plasma membrane	25.38	12.02
Zm00001d018930_P003	Maize	nucleus	25.13	11.99
Zm00001d033274_P005	Maize	nucleus	22.08	11.85
Zm00001d012688_P001	Maize	nucleus	17.51	11.24
Zm00001d043378_P001	Maize	nucleus	16.5	10.64

Protein Annotations

EMBL:BT054046	EMBL:EU967670	EnsemblPlants:Zm00001d031008_P001	EnsemblPlants:Zm00001d031008_T001	EnsemblPlantsGene:Zm00001d031008	EntrezGene:100284254
InterPro:CRC	InterPro:IPR005172	InterPro:Lin-54_fam	InterPro:Tesmin/TSO1-like_CXC	PANTHER:PTHR12446	PANTHER:PTHR12446:SF44
PFAM:PF03638	PFscan:PS51634	ProteinID:ONM01962.1	SEG:seg	SMART:SM01114	UniParc:UPI000182DF8A
UniProt:B6TRQ5	MapMan:15.5.9	:	:	:	:

Description

CPP-transcription factor 2Protein tesmin/TSO1-like CXC 4

Coordinates

chr1:-:173135204..173140452

Molecular Weight (calculated)

42987.3 Da

IEP (calculated)

7.604

GRAVY (calculated)

-0.557

Length

394 amino acids

Sequence
(BLAST)

001: MEAEVGPPNP PRPEPAGSEP DDARLSPPPP APAPPPPPPP PPAAEAAAAP TASAAFSLQA PAPAPAEANG SSDRKRRRKA EDGDGCKTCS CKKSRCLKLY
101: CVCFASGLHC TESCGCEPCH NKPQLQGTLR MATVLPLKPV QTFEAGQDIV EQVIRSPMDL IRRKCTCKKS GCLKKYCDCY QGGAGCSINC KCDDCRNPFG
201: RKVGVILDGK SSLTAPILHE RNGTEVDSSD EEDDFYMNRQ LSPIPPSPVS RESSFQQETL VGVEVQTMNG HLYPKPLTQV RPEPSSWQLS RRPIEEPRGE
301: IWRFSRRPSE DGTSDAMEVH AVAPRESKKA AEVRGDRFGI PRCIEVMSAM AELSPVEKSL APDVFLDASN REIFLSLSVD IRPIWLRRKM KSLV

Best Arabidopsis Sequence Match ( AT4G14770.2 )
(BLAST)

001: MDSPVFNYIN SLSPIRPVRS IPNPNQFSSL NFTSPPSVFT SPHLTSSHKE SRFFKTHNSS SSDPTNSVES QEDESTSHEE VPAEGEDTKG LNIDDCMREE
101: ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE AFRCFMMQRA SNSEARFRNG
201: VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD CKTNVTQDYS CSANIQVGLQ
301: RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE PCSCIDCFNK PIHEDVVLAT
401: RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK DGSSIDMEAE QEEENETSEK
501: SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE KSFETVAVDG AEQMPEILIH
601: SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH

Arabidopsis Description

TCX2Protein tesmin/TSO1-like CXC 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JIF5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.