Factsheet for Bra001128.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74164	Canola	nucleus	95.2	95.02
AT3G04850.1	Thale cress	cytosol	65.26	53.21
Bra025590.1-P	Field mustard	cytosol	7.68	28.17
Bra023810.1-P	Field mustard	nucleus, plastid	29.94	26.35
Bra033920.1-P	Field mustard	plastid	28.98	26.26
Bra036900.1-P	Field mustard	nucleus, plastid	31.09	25.12
Bra033919.1-P	Field mustard	nucleus	29.56	20.59
Bra041164.1-P	Field mustard	nucleus	3.84	20.2
TraesCS1B01G340500.1	Wheat	cytosol, plastid	14.4	20.05
TraesCS1D01G329200.1	Wheat	plastid	14.4	20.05
TraesCS1A01G327100.1	Wheat	plastid	14.2	19.89
Os05t0509400-01	Rice	cytosol, nucleus, plasma membrane, plastid	14.2	19.79
Zm00001d038660_P003	Maize	nucleus	13.44	19.44
EES19781	Sorghum	cytosol	13.05	18.94
HORVU1Hr1G078000.1	Barley	plastid	14.2	17.92
Zm00001d031008_P001	Maize	nucleus	13.44	17.77
EES17352	Sorghum	nucleus	13.24	16.87
HORVU5Hr1G013160.11	Barley	nucleus, plastid	13.05	16.63
TraesCS5A01G054200.1	Wheat	nucleus, plastid	11.32	16.53
Zm00001d041444_P002	Maize	nucleus	12.48	16.5
TraesCS5D01G065500.1	Wheat	nucleus, plastid	11.32	16.43
TraesCS5B01G062200.1	Wheat	nucleus, plastid	11.32	16.39
Bra021165.1-P	Field mustard	nucleus	10.17	16.26
Bra036551.1-P	Field mustard	nucleus	14.01	16.01
Os12t0605300-01	Rice	nucleus	12.28	15.72
Bra009859.1-P	Field mustard	nucleus	14.01	14.34
Bra041042.1-P	Field mustard	nucleus	13.82	14.31
Bra011075.1-P	Field mustard	nucleus	14.2	14.02
Bra010348.1-P	Field mustard	nucleus	14.78	13.41
Bra001884.1-P	Field mustard	nucleus, plastid	30.52	13.0
Bra024171.1-P	Field mustard	nucleus	13.44	12.68
Zm00001d010713_P006	Maize	cytosol	8.64	12.33
Bra023807.1-P	Field mustard	nucleus	4.03	11.23

Protein Annotations

EnsemblPlants:Bra001128.1	EnsemblPlants:Bra001128.1-P	EnsemblPlantsGene:Bra001128	InterPro:CRC	InterPro:IPR005172	InterPro:Lin-54_fam
InterPro:Tesmin/TSO1-like_CXC	PANTHER:PTHR12446	PANTHER:PTHR12446:SF46	PFAM:PF03638	PFscan:PS51634	SEG:seg
SMART:SM01114	UniParc:UPI00025409C3	UniProt:M4CA99	MapMan:15.5.9	:	:

Description

AT3G04850 (E=3e-072) | tesmin/TSO1-like CXC domain-containing protein

Coordinates

chrA03:-:14879606..14881982

Molecular Weight (calculated)

57329.5 Da

IEP (calculated)

4.799

GRAVY (calculated)

-0.369

Length

521 amino acids

Sequence
(BLAST)

001: MDTPDKNRIS AVSYCNFEDS PVFQYINGLS PIEPVKADHA FHSLALASPS SLFSSPQIVC IKRQDVLVQL KCSGPEEEMA NVSETEAFKE QVKVAIELAS
101: SLRKGEDGCC SQMGSSDEVV VPMDAENEVI KQSGELCRRI NELDADSDMV IQTEEMEAET GSGEQEIPNG KDSRICSFTV VPQQFSYHSG NVVQPCSVQV
201: AAGALDTTLS SLSNVAAFDS TAKAEDEEEI ELQRSSKQRS VRRRCLTFDL GGSCKRIPLR DSTNDSPLDF TSINEAPTPQ SCLHSSKQET DEILPVPRTI
301: GLHLNALVNP YRNKFTAKDG CVLSHAAEEF TTPVSTIRDL VACDNQIMEE ASERSMEGEW VEELGSCKRC RCKRSRCLKL YCDCFAAGLY CVEPCSCQNC
401: FNRPIHEDIV IRSRRNVEAR NPLAFAPKVV LTSASATYFG EESNKTPASA RHMRGCNCKK SGCSKKYCEC YLVGVGCSAS CRCIGCKNIL CQTNEQFHLP
501: CAVESDAVTI NEEAKDHCDY I

Best Arabidopsis Sequence Match ( AT3G04850.1 )
(BLAST)

001: MDTPDKNRIS AVSFCNFEDS PVFQYINDLS PIEPVKPGRP ENILHSLVFT SPSSSSSLFC SPQLNSYRDS RFFIKRHRSL DLSSPVVLIG ETLKNSPDAL
101: WEEKLKCRPE KLENVSEPKP FKEQISLAIE LANSLKHGRD GCDIQMVSCD EVPMDADDEI GSGGGSRELS DELCRQSFDP LDFDADSDGV LHTDEMEAES
201: GFGKEVIMFD VADIQNYEQQ IPRTTDPRFY SLASEPQQFS IYCNNSNYVE EREGSCSVQV AAGAPDINLS CSSKVAAIDS TAEAEDKEDK DLQPSGKQRS
301: VRRRCLTFDM GGSHKRIPLR DSTNDLPLDS TSINKAPSPQ NCLDTSKQDT DEILPIPRTI GLHLNGFVNP SVSSGRKKKK IKDGQAFPST TFHYNIEDEF
401: STPVSTKRDL VVFSDVKIME PPERSVEGEC FDQLMAMENR QLSQGLDELG SCKRCKCRKS QCLKLYCECF SAGLFCGEPC SCQNCFNKPI HEDLVMKSRE
501: VIKARNPLAF APKVVSTSDT VIDLWVENSK TPASARHKRG CNCRKSGCSK KYCECFMMGV GCSSNCRCMG CKNTFGHTNE QCAGDSDVVT INDEAKHYGD
601: HGDASRQNEE ILTSERNRLL LPGSVAFRSL TSLSNLSEL

Arabidopsis Description

TCX4Protein tesmin/TSO1-like CXC 4 [Source:UniProtKB/Swiss-Prot;Acc:Q84JZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.