Factsheet for Bra033919.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10669	Canola	nucleus	98.53	98.53
Bra023807.1-P	Field mustard	nucleus	18.45	73.8
AT3G22780.1	Thale cress	nucleus	66.71	71.8
Os03t0638300-01	Rice	cytosol	8.29	54.87
Bra036900.1-P	Field mustard	nucleus, plastid	45.19	52.4
Bra023810.1-P	Field mustard	nucleus, plastid	39.84	50.34
Bra033920.1-P	Field mustard	plastid	38.1	49.57
Bra001884.1-P	Field mustard	nucleus, plastid	65.51	40.07
KRH77830	Soybean	nucleus	39.44	38.11
KRH27657	Soybean	nucleus	39.3	37.98
PGSC0003DMT400082098	Potato	nucleus	40.64	36.8
Solyc09g082500.2.1	Tomato	nucleus	40.78	36.79
KRH35487	Soybean	nucleus	36.5	35.92
KRG91344	Soybean	nucleus	37.17	35.92
VIT_14s0030g01800.t01	Wine grape	nucleus	37.57	34.86
GSMUA_Achr9P10600_001	Banana	nucleus	32.89	33.33
GSMUA_Achr8P20460_001	Banana	nucleus	35.43	32.92
Bra025590.1-P	Field mustard	cytosol	5.88	30.99
GSMUA_Achr9P25670_001	Banana	nucleus	33.69	30.4
Bra001128.1-P	Field mustard	nucleus	20.59	29.56
HORVU5Hr1G012950.1	Barley	nucleus	30.08	29.37
TraesCS4D01G026100.1	Wheat	nucleus	30.88	29.35
TraesCS5B01G062400.1	Wheat	nucleus	29.95	29.28
Os12t0605500-01	Rice	nucleus	29.68	29.21
Os07t0176200-01	Rice	nucleus	30.48	29.16
TraesCS5A01G053800.1	Wheat	nucleus	29.81	29.15
TraesCS5D01G065300.1	Wheat	nucleus	29.81	29.15
OQU88523	Sorghum	nucleus	30.08	28.99
TraesCS4B01G028500.1	Wheat	nucleus	30.21	28.64
EES17353	Sorghum	nucleus	29.14	28.42
TraesCS4A01G284600.2	Wheat	nucleus	30.35	27.12
Zm00001d018930_P003	Maize	nucleus	29.81	27.0
EER93767	Sorghum	nucleus	25.94	25.97
Zm00001d041445_P007	Maize	golgi, nucleus, plasma membrane	29.01	25.96
Zm00001d031009_P004	Maize	golgi, plasma membrane	28.74	25.84
HORVU4Hr1G004280.15	Barley	nucleus, plastid	30.61	24.81
Zm00001d033274_P005	Maize	nucleus	23.93	24.39
Bra021165.1-P	Field mustard	nucleus	9.36	21.47
Bra041164.1-P	Field mustard	nucleus	2.81	21.21
Bra036551.1-P	Field mustard	nucleus	12.57	20.61
Bra041042.1-P	Field mustard	nucleus	12.83	19.09
Bra009859.1-P	Field mustard	nucleus	12.97	19.06
Bra011075.1-P	Field mustard	nucleus	12.3	17.42
Bra010348.1-P	Field mustard	nucleus	13.37	17.42
Bra024171.1-P	Field mustard	nucleus	12.17	16.49

Protein Annotations

EnsemblPlants:Bra033919.1	EnsemblPlants:Bra033919.1-P	EnsemblPlantsGene:Bra033919	InterPro:CRC	InterPro:IPR005172	InterPro:Lin-54_fam
InterPro:Tesmin/TSO1-like_CXC	PANTHER:PTHR12446	PANTHER:PTHR12446:SF21	PFAM:PF03638	PFscan:PS51634	SEG:seg
SMART:SM01114	UniParc:UPI0002547436	UniProt:M4EYM7	MapMan:15.5.9	:	:

Description

AT3G22780 (E=2e-239) TSO1, ATTSO1 | TSO1 (CHINESE FOR 'UGLY'); transcription factor

Coordinates

chrA05:-:15230894..15234523

Molecular Weight (calculated)

82237.9 Da

IEP (calculated)

7.711

GRAVY (calculated)

-0.628

Length

748 amino acids

Sequence
(BLAST)

001: MDNSQKKKIE TPTPKSKFED SPVFNYINNL SPIEAVRSIP TVQTFNSLSF TSPPPVFTSP HASFHRESRF FRCHNSVERS KALESLDRSV STQEVVVASG
101: EVDLNKEATL EDQEEETSCD RVDSPGTGDI VTQVLLDPSG GAPQGEDDGS SSQDVSVGLR KILDAQKENG TPRLMADAAE LLVFRSPNDS EAFGCLVDKI
201: SSSERRFCAG VKLTKHRDIT KDVPANDNQP LAVVPNQLVS NLHRGSMRRR CLDFEVLGKR KKDIADDDQQ TVGDNKAESS SKCVVPGIGL HLNAIAMASR
301: GIKINTIHED STSVEIQKSF LGSTTPVQSQ DIMRETLDQA ESEPGKGLAV EEETLKPLVF EELNQDSLQK KKQVRKVEEP GEGDSCKRCN CKKSKCLKLY
401: CECFAAGVYC IEPCSCVDCF NRPIHEDTVL ATRKQIESRN PLAFAPKVIR NSDSIMETSD DASKTPASAR HKRGCNCKKS NCLKKYCECF QSGVGCSINC
501: RCEGCKNAFG KKDAYLLAIM ESKQEEDLSK IQQNSDLSKE VEQNHPSSDQ PSTPLPPYRH MVVHQPFLSK NRLPPTQFFL GAGSSSFRKP DGDLAQARIE
601: KKPLETVTED KTEIMPEILS NTPITTVKAI SPNSKRVSPP HIGSSESGSI LGKRTNGRKL ILRAQPLQNA QSSFAFPAAS SAPQQSVTSN QPAKHVKKAS
701: CGRPLKIRKI ENIPSGSGTF WSPFTDRSFE VFGSRVYDRS ATDSQPPQ

Best Arabidopsis Sequence Match ( AT3G22780.1 )
(BLAST)

001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ

Arabidopsis Description

TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.