Factsheet for AT3G22780.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54821	Canola	nucleus	72.81	74.52
CDY34235	Canola	endoplasmic reticulum, extracellular, vacuole	30.07	73.08
Bra033919.1-P	Field mustard	nucleus	71.8	66.71
CDY10669	Canola	nucleus	71.22	66.18
CDY64242	Canola	nucleus	23.6	62.12
AT4G14770.1	Thale cress	nucleus	55.25	56.97
Os03t0638300-01	Rice	cytosol	8.92	54.87
AT3G22760.1	Thale cress	nucleus	45.9	52.38
KRH77830	Soybean	nucleus	44.03	39.53
KRH27657	Soybean	nucleus	43.88	39.41
Bra001884.1-P	Field mustard	nucleus, plastid	69.21	39.33
CDX94892	Canola	nucleus, plastid	69.93	39.16
CDX92957	Canola	nucleus, plastid	67.63	38.65
KRG91344	Soybean	nucleus	43.02	38.63
KRH35487	Soybean	nucleus	42.16	38.55
PGSC0003DMT400082098	Potato	nucleus	45.61	38.38
Solyc09g082500.2.1	Tomato	nucleus	45.32	38.0
VIT_14s0030g01800.t01	Wine grape	nucleus	42.16	36.35
GSMUA_Achr9P10600_001	Banana	nucleus	37.7	35.5
GSMUA_Achr8P20460_001	Banana	nucleus	39.71	34.29
GSMUA_Achr9P25670_001	Banana	nucleus	37.55	31.48
OQU88523	Sorghum	nucleus	33.53	30.03
TraesCS4D01G026100.1	Wheat	nucleus	33.96	29.99
Os12t0605500-01	Rice	nucleus	32.52	29.74
HORVU5Hr1G012950.1	Barley	nucleus	32.52	29.5
Os07t0176200-01	Rice	nucleus	33.09	29.41
TraesCS4B01G028500.1	Wheat	nucleus	33.38	29.4
TraesCS5A01G053800.1	Wheat	nucleus	32.23	29.28
TraesCS5B01G062400.1	Wheat	nucleus	32.23	29.28
TraesCS5D01G065300.1	Wheat	nucleus	32.23	29.28
TraesCS4A01G284600.2	Wheat	nucleus	33.96	28.2
EES17353	Sorghum	nucleus	30.79	27.9
Zm00001d018930_P003	Maize	nucleus	32.66	27.48
AT3G04850.1	Thale cress	cytosol	25.18	27.39
EER93767	Sorghum	nucleus	28.2	26.24
Zm00001d031009_P004	Maize	golgi, plasma membrane	31.08	25.96
Zm00001d041445_P007	Maize	golgi, nucleus, plasma membrane	31.08	25.84
HORVU4Hr1G004280.15	Barley	nucleus, plastid	33.81	25.46
Zm00001d033274_P005	Maize	nucleus	26.47	25.07
AT3G16160.1	Thale cress	nucleus	11.22	21.2
AT4G29000.1	Thale cress	nucleus	14.68	16.92
AT5G25790.2	Thale cress	nucleus	11.65	16.07
AT2G20110.2	Thale cress	nucleus	13.09	15.74

Protein Annotations

MapMan:15.5.9	EntrezGene:821849	ProteinID:AEE76676.1	EMBL:AF204059	EMBL:AF206324	ArrayExpress:AT3G22780
EnsemblPlantsGene:AT3G22780	RefSeq:AT3G22780	TAIR:AT3G22780	RefSeq:AT3G22780-TAIR-G	EnsemblPlants:AT3G22780.1	TAIR:AT3G22780.1
EMBL:AY046019	EMBL:AY142642	Unigene:At.24953	ProteinID:BAB01253.1	InterPro:CRC	ncoils:Coil
GO:GO:0000003	GO:GO:0003674	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009934
GO:GO:0009987	GO:GO:0046872	GO:GO:0048444	GO:GO:0051302	InterPro:IPR005172	InterPro:Lin-54_fam
RefSeq:NP_566718.2	PFAM:PF03638	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PFscan:PS51634	PANTHER:PTHR12446	PANTHER:PTHR12446:SF21	UniProt:Q9LUI3
SMART:SM01114	Symbol:TSO1	InterPro:Tesmin/TSO1-like_CXC	UniParc:UPI00000A5291	SEG:seg	:

Description

TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]

Coordinates

chr3:+:8048802..8052504

Molecular Weight (calculated)

76280.8 Da

IEP (calculated)

6.675

GRAVY (calculated)

-0.613

Length

695 amino acids

Sequence
(BLAST)

001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.