Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67857 | Canola | nucleus, plastid | 67.98 | 68.54 |
| Bra023810.1-P | Field mustard | nucleus, plastid | 66.34 | 68.24 |
| CDY64240 | Canola | cytosol, plastid | 64.86 | 66.28 |
| CDY54822 | Canola | cytosol, plastid | 58.78 | 65.21 |
| CDY10668 | Canola | nucleus, plastid | 60.26 | 63.94 |
| Bra033920.1-P | Field mustard | plastid | 58.29 | 61.74 |
| AT4G14770.1 | Thale cress | nucleus | 59.61 | 53.86 |
| Os03t0638300-01 | Rice | cytosol | 9.85 | 53.1 |
| AT3G22780.1 | Thale cress | nucleus | 52.38 | 45.9 |
| KRH77830 | Soybean | nucleus | 45.48 | 35.79 |
| KRH27657 | Soybean | nucleus | 44.83 | 35.27 |
| KRH35487 | Soybean | nucleus | 43.84 | 35.13 |
| KRG91344 | Soybean | nucleus | 44.5 | 35.01 |
| PGSC0003DMT400082098 | Potato | nucleus | 44.99 | 33.17 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 40.07 | 33.06 |
| Solyc09g082500.2.1 | Tomato | nucleus | 44.66 | 32.81 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 42.36 | 32.05 |
| VIT_14s0030g01800.t01 | Wine grape | nucleus | 41.38 | 31.27 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 40.07 | 29.43 |
| TraesCS4D01G026100.1 | Wheat | nucleus | 36.95 | 28.59 |
| TraesCS5A01G053800.1 | Wheat | nucleus | 35.8 | 28.5 |
| TraesCS5D01G065300.1 | Wheat | nucleus | 35.8 | 28.5 |
| OQU88523 | Sorghum | nucleus | 36.29 | 28.48 |
| TraesCS5B01G062400.1 | Wheat | nucleus | 35.63 | 28.37 |
| HORVU5Hr1G012950.1 | Barley | nucleus | 35.63 | 28.33 |
| TraesCS4B01G028500.1 | Wheat | nucleus | 36.62 | 28.26 |
| Os12t0605500-01 | Rice | nucleus | 35.14 | 28.16 |
| Os07t0176200-01 | Rice | nucleus | 35.8 | 27.88 |
| TraesCS4A01G284600.2 | Wheat | nucleus | 36.95 | 26.88 |
| EES17353 | Sorghum | nucleus | 33.83 | 26.86 |
| AT3G04850.1 | Thale cress | cytosol | 27.42 | 26.13 |
| EER93767 | Sorghum | nucleus | 31.53 | 25.7 |
| Zm00001d018930_P003 | Maize | nucleus | 34.15 | 25.18 |
| Zm00001d033274_P005 | Maize | nucleus | 29.89 | 24.8 |
| Zm00001d041445_P007 | Maize | golgi, nucleus, plasma membrane | 33.99 | 24.76 |
| Zm00001d031009_P004 | Maize | golgi, plasma membrane | 33.5 | 24.52 |
| HORVU4Hr1G004280.15 | Barley | nucleus, plastid | 35.63 | 23.51 |
| AT3G16160.1 | Thale cress | nucleus | 12.15 | 20.11 |
| AT5G25790.2 | Thale cress | nucleus | 14.29 | 17.26 |
| AT4G29000.1 | Thale cress | nucleus | 15.44 | 15.59 |
| AT2G20110.2 | Thale cress | nucleus | 14.78 | 15.57 |
Protein Annotations
| MapMan:15.5.9 | EntrezGene:821847 | ProteinID:AEE76674.1 | EMBL:AF205142 | ProteinID:ANM63592.1 | ArrayExpress:AT3G22760 |
| EnsemblPlantsGene:AT3G22760 | RefSeq:AT3G22760 | TAIR:AT3G22760 | RefSeq:AT3G22760-TAIR-G | EnsemblPlants:AT3G22760.1 | TAIR:AT3G22760.1 |
| EMBL:AY099653 | EMBL:AY128837 | ProteinID:BAB01251.1 | InterPro:CRC | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0044212 | GO:GO:0046872 | InterPro:IPR005172 | InterPro:Lin-54_fam |
| RefSeq:NP_001325669.1 | RefSeq:NP_566717.1 | PFAM:PF03638 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020003 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020047 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51634 | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF21 |
| UniProt:Q8L548 | SMART:SM01114 | Symbol:SOL1 | InterPro:Tesmin/TSO1-like_CXC | UniParc:UPI00000A5AF1 | SEG:seg |
Description
TCX3Protein tesmin/TSO1-like CXC 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L548]
Coordinates
chr3:+:8044427..8048263
Molecular Weight (calculated)
66657.7 Da
IEP (calculated)
8.207
GRAVY (calculated)
-0.576
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTPEKSETQ IGTPVSKLKV EDSPVFSYIC NLSPIKTIKP IPITCPLSSL NYASPPSVFT SPHAVSHKES RFRSQKDVSA SKEVGEEEAL VGSEPEQSYK
101: NDCNTPRVTN DVKDNGCGKD LQVMMDNVKK KSDTPDWETL IAATTELIYG SPRESEAFSC LLKKTSNSEA RLRGSITATS VAVTNTDVVN NESESVDALS
201: ILHRGVRRRC LDFEVKGNNQ QTLGESSSSC VVPSIGLHLN TIAMSSKDKN VANEYSFSGN IKVGVQSSLT PVLHSQHDIV RENESGKDSG QIIEVVPKSL
301: ASVDLTPISP KKKRRKSEQS GEGDSSCKRC NCKKSKCLKL YCECFAAGFY CIEPCSCINC FNKPIHKDVV LATRKQIESR NPLAFAPKVI RNSDSIIEVG
401: EDASKTPASA RHKRGCNCKK SNCLKKYCEC YQGGVGCSIN CRCEGCKNAF GRKDGSLFEQ DEENETSGTP GTKKTQQNVE LFKPAAPPST PIPFRQPLAQ
501: LPISSNNRLL PPQSHFHHGA IGSSSSGIYN IRKPDMSLLS HSRIETITED IDDMSENLIH SPITTLSPNS KRVSLSHLDS PESTPWRRNG GGRNLIRSFP
601: TFPSLTPHH
101: NDCNTPRVTN DVKDNGCGKD LQVMMDNVKK KSDTPDWETL IAATTELIYG SPRESEAFSC LLKKTSNSEA RLRGSITATS VAVTNTDVVN NESESVDALS
201: ILHRGVRRRC LDFEVKGNNQ QTLGESSSSC VVPSIGLHLN TIAMSSKDKN VANEYSFSGN IKVGVQSSLT PVLHSQHDIV RENESGKDSG QIIEVVPKSL
301: ASVDLTPISP KKKRRKSEQS GEGDSSCKRC NCKKSKCLKL YCECFAAGFY CIEPCSCINC FNKPIHKDVV LATRKQIESR NPLAFAPKVI RNSDSIIEVG
401: EDASKTPASA RHKRGCNCKK SNCLKKYCEC YQGGVGCSIN CRCEGCKNAF GRKDGSLFEQ DEENETSGTP GTKKTQQNVE LFKPAAPPST PIPFRQPLAQ
501: LPISSNNRLL PPQSHFHHGA IGSSSSGIYN IRKPDMSLLS HSRIETITED IDDMSENLIH SPITTLSPNS KRVSLSHLDS PESTPWRRNG GGRNLIRSFP
601: TFPSLTPHH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.