Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29770 | Canola | nucleus, plastid | 75.67 | 78.83 |
| Bra036900.1-P | Field mustard | nucleus, plastid | 74.63 | 77.98 |
| CDY42785 | Canola | nucleus, plastid | 75.22 | 77.17 |
| AT3G22760.1 | Thale cress | nucleus | 53.86 | 59.61 |
| Os03t0638300-01 | Rice | cytosol | 9.35 | 55.75 |
| AT3G22780.1 | Thale cress | nucleus | 56.97 | 55.25 |
| KRH77830 | Soybean | nucleus | 47.63 | 41.47 |
| KRH27657 | Soybean | nucleus | 47.18 | 41.09 |
| KRH35487 | Soybean | nucleus | 46.29 | 41.05 |
| KRG91344 | Soybean | nucleus | 47.03 | 40.96 |
| PGSC0003DMT400082098 | Potato | nucleus | 48.07 | 39.23 |
| Solyc09g082500.2.1 | Tomato | nucleus | 48.22 | 39.2 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 39.47 | 36.04 |
| VIT_14s0030g01800.t01 | Wine grape | nucleus | 42.88 | 35.86 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 40.65 | 34.04 |
| TraesCS4D01G026100.1 | Wheat | nucleus | 38.43 | 32.91 |
| OQU88523 | Sorghum | nucleus | 37.69 | 32.73 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 39.91 | 32.45 |
| TraesCS4B01G028500.1 | Wheat | nucleus | 37.54 | 32.07 |
| TraesCS5D01G065300.1 | Wheat | nucleus | 36.35 | 32.03 |
| TraesCS5A01G053800.1 | Wheat | nucleus | 36.2 | 31.9 |
| HORVU5Hr1G012950.1 | Barley | nucleus | 36.2 | 31.85 |
| TraesCS5B01G062400.1 | Wheat | nucleus | 36.05 | 31.76 |
| Os07t0176200-01 | Rice | nucleus | 36.8 | 31.71 |
| Os12t0605500-01 | Rice | nucleus | 35.76 | 31.71 |
| TraesCS4A01G284600.2 | Wheat | nucleus | 38.43 | 30.94 |
| EES17353 | Sorghum | nucleus | 34.72 | 30.51 |
| Zm00001d018930_P003 | Maize | nucleus | 35.91 | 29.3 |
| AT3G04850.1 | Thale cress | cytosol | 26.85 | 28.33 |
| Zm00001d041445_P007 | Maize | golgi, nucleus, plasma membrane | 34.72 | 27.99 |
| Zm00001d031009_P004 | Maize | golgi, plasma membrane | 34.12 | 27.64 |
| EER93767 | Sorghum | nucleus | 30.56 | 27.58 |
| HORVU4Hr1G004280.15 | Barley | nucleus, plastid | 37.24 | 27.19 |
| Zm00001d033274_P005 | Maize | nucleus | 27.74 | 25.48 |
| AT3G16160.1 | Thale cress | nucleus | 12.02 | 22.01 |
| AT5G25790.2 | Thale cress | nucleus | 13.8 | 18.45 |
| AT4G29000.1 | Thale cress | nucleus | 15.73 | 17.58 |
| AT2G20110.2 | Thale cress | nucleus | 14.99 | 17.47 |
Protein Annotations
| MapMan:15.5.9 | EntrezGene:827132 | ProteinID:AEE83496.1 | ArrayExpress:AT4G14770 | EnsemblPlantsGene:AT4G14770 | RefSeq:AT4G14770 |
| TAIR:AT4G14770 | RefSeq:AT4G14770-TAIR-G | EnsemblPlants:AT4G14770.1 | TAIR:AT4G14770.1 | ProteinID:CAB10256.1 | ProteinID:CAB78519.1 |
| InterPro:CRC | ncoils:Coil | UniProt:F4JIF5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0046872 | InterPro:IPR005172 | InterPro:Lin-54_fam | RefSeq:NP_193213.5 |
| PFAM:PF03638 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007098 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0025022 | PFscan:PS51634 | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF21 |
| SMART:SM01114 | Symbol:TCX2 | InterPro:Tesmin/TSO1-like_CXC | UniParc:UPI0001E92F05 | SEG:seg | : |
Description
TCX2Protein tesmin/TSO1-like CXC 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JIF5]
Coordinates
chr4:-:8480634..8484976
Molecular Weight (calculated)
74057.4 Da
IEP (calculated)
5.480
GRAVY (calculated)
-0.707
Length
674 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTPQKSITQ IGTPISKSRF EDSPVFNYIN SLSPIRPVRS IPNPNQFSSL NFTSPPSVFT SPHLTSSHKE SRFFKTHNSS SSDPTNSVES QEDESTSHEE
101: VPAEGEDTKG LNIDDCMREE ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE
201: AFRCFMMQRA SNSEARFRNG VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD
301: CKTNVTQDYS CSANIQVGLQ RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE
401: PCSCIDCFNK PIHEDVVLAT RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK
501: DGSSIDMEAE QEEENETSEK SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE
601: KSFETVAVDG AEQMPEILIH SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
101: VPAEGEDTKG LNIDDCMREE ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE
201: AFRCFMMQRA SNSEARFRNG VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD
301: CKTNVTQDYS CSANIQVGLQ RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE
401: PCSCIDCFNK PIHEDVVLAT RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK
501: DGSSIDMEAE QEEENETSEK SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE
601: KSFETVAVDG AEQMPEILIH SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.