Factsheet for AT5G25790.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036551.1-P	Field mustard	nucleus	57.94	64.04
CDY19795	Canola	nucleus	57.14	63.3
CDX88196	Canola	nucleus	63.49	62.75
Bra009859.1-P	Field mustard	nucleus	63.29	62.67
CDX80536	Canola	nucleus	63.1	61.27
CDY65712	Canola	nucleus	55.36	60.92
CDY05340	Canola	nucleus	53.57	56.49
HORVU7Hr1G081540.1	Barley	plastid	23.61	40.75
Os06t0332700-00	Rice	nucleus	21.63	35.97
Os02t0274600-00	Rice	cytosol, nucleus	28.97	33.41
AT4G29000.1	Thale cress	nucleus	36.11	30.18
TraesCS7D01G338500.1	Wheat	nucleus, plastid	28.97	30.04
TraesCS7A01G341100.2	Wheat	nucleus, plastid	28.77	29.84
TraesCS7B01G242300.1	Wheat	nucleus	28.37	29.48
EER89807	Sorghum	cytosol	29.17	28.88
Zm00001d037461_P001	Maize	cytosol	28.77	28.38
AT2G20110.2	Thale cress	nucleus	32.54	28.37
AT3G16160.1	Thale cress	nucleus	20.04	27.45
Zm00001d015990_P001	Maize	nucleus	26.98	25.66
KXG30022	Sorghum	nucleus, plastid	26.79	24.86
TraesCS2B01G144400.2	Wheat	plastid	28.17	24.11
Os08t0369600-01	Rice	cytosol, nucleus, peroxisome	17.46	23.85
TraesCS2A01G122300.2	Wheat	plastid	27.38	23.47
TraesCS2D01G125000.1	Wheat	plastid	27.38	23.47
Os08t0363900-00	Rice	cytosol	16.47	23.38
HORVU2Hr1G021360.2	Barley	plastid	28.17	23.32
AT3G22760.1	Thale cress	nucleus	17.26	14.29
AT4G14770.1	Thale cress	nucleus	18.45	13.8
AT3G22780.1	Thale cress	nucleus	16.07	11.65
AT3G04850.1	Thale cress	cytosol	14.09	11.11

Protein Annotations

ArrayExpress:AT5G25790	EnsemblPlants:AT5G25790.2	EnsemblPlantsGene:AT5G25790	EntrezGene:832648	InterPro:CRC	InterPro:IPR005172
InterPro:Lin-54_fam	InterPro:Tesmin/TSO1-like_CXC	PANTHER:PTHR12446	PANTHER:PTHR12446:SF14	PFAM:PF03638	PFscan:PS51634
ProteinID:ANM71221.1	RefSeq:AT5G25790	RefSeq:AT5G25790-TAIR-G	RefSeq:NP_001332765.1	SEG:seg	SMART:SM01114
TAIR:AT5G25790	Unigene:At.50483	UniParc:UPI000848BBDE	UniProt:A0A1R7T3L4	MapMan:15.5.9	:

Description

Tesmin/TSO1-like CXC domain-containing protein [Source:TAIR;Acc:AT5G25790]

Coordinates

chr5:-:8977057..8979289

Molecular Weight (calculated)

56808.7 Da

IEP (calculated)

8.275

GRAVY (calculated)

-0.863

Length

504 amino acids

Sequence
(BLAST)

001: MEDLSNQNLL PRQSDISIPA EKMDSFQKSL EPPPCSPVKS SQQSETEVTP PQKPPLHQFG HNQVQKNRVS NQDPSTSRRH NEVESKENTP NKQQKHCNCK
101: NSKCLKLYCE CFASGSYCNG CNCVNCHNKL ENESSRQVAI SGILERNPDA FKPKIAGSPH GMKDLQENVQ QVLLIGKHSK GCHCRKSGCL KKYCECYQAN
201: ILCSENCRCQ DCKNFEGSEE RKALLHGSQV SDTYIQQMTN AAVNRAIDMS AYLYPPESRK RKSKDISDSV VSSYGVQYQR ANHVRRNGEN SLFSLPNNKA
301: VSGSTTSAYR SSWSNTFQPH HVRELCSLLV SNSVDVANKL SDKGRKNDKG PSSLDGAQRV ANEINDSPDC VLDANRMDEK PISPATRALM CDEEHEIGSE
401: KETSARVKTS QEKEDTDTSS GIYLEQERQI LSIFRDYLIQ LSNRARINGN LDIVSLFRYL QVEDCANLRH YFKQVKISKA TQIQVERNQK MKNKAIETQI
501: RDIA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.