Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G338500.1 | Wheat | nucleus, plastid | 97.94 | 97.94 |
| TraesCS7B01G242300.1 | Wheat | nucleus | 95.27 | 95.46 |
| HORVU7Hr1G081540.1 | Barley | plastid | 53.5 | 89.04 |
| Os06t0332700-00 | Rice | nucleus | 40.74 | 65.35 |
| EER89807 | Sorghum | cytosol | 63.37 | 60.51 |
| Zm00001d037461_P001 | Maize | cytosol | 61.52 | 58.51 |
| CDY65712 | Canola | nucleus | 28.6 | 30.35 |
| Bra036551.1-P | Field mustard | nucleus | 28.19 | 30.04 |
| CDY19795 | Canola | nucleus | 27.78 | 29.67 |
| TraesCS3A01G304800.1 | Wheat | plastid | 37.45 | 29.59 |
| AT5G25790.2 | Thale cress | nucleus | 29.84 | 28.77 |
| Bra009859.1-P | Field mustard | nucleus | 29.63 | 28.29 |
| CDX88196 | Canola | nucleus | 29.63 | 28.24 |
| CDX80536 | Canola | nucleus | 29.42 | 27.55 |
| CDY28377 | Canola | nucleus | 18.52 | 27.44 |
| CDY05340 | Canola | nucleus | 26.34 | 26.78 |
| Bra021165.1-P | Field mustard | nucleus | 17.9 | 26.69 |
| AT3G16160.1 | Thale cress | nucleus | 20.16 | 26.63 |
| TraesCS3A01G219300.1 | Wheat | nucleus | 13.17 | 26.45 |
| CDY20184 | Canola | cytosol | 18.31 | 26.18 |
| TraesCS2A01G122300.2 | Wheat | plastid | 29.63 | 24.49 |
| TraesCS5A01G054200.1 | Wheat | nucleus, plastid | 13.58 | 18.49 |
| TraesCS1A01G327100.1 | Wheat | plastid | 13.37 | 17.47 |
| TraesCS5A01G053800.1 | Wheat | nucleus | 17.08 | 10.85 |
| TraesCS4A01G284600.2 | Wheat | nucleus | 17.49 | 10.16 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G341100.2 | EnsemblPlantsGene:TraesCS7A01G341100 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF35 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg | SMART:SM01114 |
| MapMan:15.5.9 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:501056917..501062329
Molecular Weight (calculated)
52837.0 Da
IEP (calculated)
7.524
GRAVY (calculated)
-0.738
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPEQQHNAQ PPAPPAAAPP HPPQPRPVAP MMHSARSWPL SFTPIKPLVE IKSVTPPKRK KQCNCKNSHC LKLYCECFAA GLYCDGCNCK QCGNKVENEH
101: ARQEAINSTK LRNPKAFQPK IENVPSALSV RKDAGAPSVP KHNKGCHCKK SGCLKKYCEC FQANILCSKN CKCMDCKNFE GSEELQAIIQ GDNASDKNNI
201: QQAANVTLNG AIGSSGYKYS PVRRKRHPED PLGPEANHLD ASQVASSSGL EGCIGYQSRS KMVYRSPLAN TIHPTDVNDL ANHLVIVCRK ATETFLTIAD
301: NKVEMEVERG IYTNADLNND KMKNREVQNG GVSQPDVATH IDQRTAGDLE SPCNNTQEDY RPASPGTQAL LCDEQGTTFG SDYRTSFPSA FHDQDTPELS
401: ALQEKTVLTG FRDYLRLLIT RGKINANNSA GMTEANASSE PAMELDAQRN HGATTGPGAS SFPPEAVERP KAPGDPENPR AGDPSA
101: ARQEAINSTK LRNPKAFQPK IENVPSALSV RKDAGAPSVP KHNKGCHCKK SGCLKKYCEC FQANILCSKN CKCMDCKNFE GSEELQAIIQ GDNASDKNNI
201: QQAANVTLNG AIGSSGYKYS PVRRKRHPED PLGPEANHLD ASQVASSSGL EGCIGYQSRS KMVYRSPLAN TIHPTDVNDL ANHLVIVCRK ATETFLTIAD
301: NKVEMEVERG IYTNADLNND KMKNREVQNG GVSQPDVATH IDQRTAGDLE SPCNNTQEDY RPASPGTQAL LCDEQGTTFG SDYRTSFPSA FHDQDTPELS
401: ALQEKTVLTG FRDYLRLLIT RGKINANNSA GMTEANASSE PAMELDAQRN HGATTGPGAS SFPPEAVERP KAPGDPENPR AGDPSA
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.