Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20184 | Canola | cytosol | 94.21 | 90.88 |
| AT3G16160.1 | Thale cress | nucleus | 62.8 | 55.98 |
| CDY44573 | Canola | cytosol | 14.33 | 33.1 |
| CDY71540 | Canola | nucleus, plastid | 22.26 | 27.55 |
| CDY67603 | Canola | cytosol | 23.17 | 26.48 |
| HORVU7Hr1G081540.1 | Barley | plastid | 21.65 | 24.32 |
| Os06t0332700-00 | Rice | nucleus | 19.82 | 21.45 |
| CDY19795 | Canola | nucleus | 29.27 | 21.1 |
| CDY05722 | Canola | nucleus | 31.1 | 20.61 |
| CDY31991 | Canola | nucleus | 31.4 | 20.36 |
| CDY05340 | Canola | nucleus | 29.57 | 20.29 |
| CDY65712 | Canola | nucleus | 28.05 | 20.09 |
| CDX88196 | Canola | nucleus | 30.18 | 19.41 |
| CDY34235 | Canola | endoplasmic reticulum, extracellular, vacuole | 16.77 | 19.23 |
| Os02t0274600-00 | Rice | cytosol, nucleus | 25.3 | 18.99 |
| CDX80536 | Canola | nucleus | 29.57 | 18.69 |
| TraesCS7B01G242300.1 | Wheat | nucleus | 27.44 | 18.56 |
| TraesCS7D01G338500.1 | Wheat | nucleus, plastid | 27.44 | 18.52 |
| TraesCS7A01G341100.2 | Wheat | nucleus, plastid | 27.44 | 18.52 |
| CDX97461 | Canola | nucleus | 31.4 | 18.2 |
| CDY66476 | Canola | nucleus | 31.71 | 18.15 |
| EER89807 | Sorghum | cytosol | 27.74 | 17.88 |
| CDY35239 | Canola | nucleus | 31.71 | 17.84 |
| Zm00001d037461_P001 | Maize | cytosol | 27.74 | 17.81 |
| CDX92907 | Canola | nucleus | 29.27 | 17.2 |
| Os08t0369600-01 | Rice | cytosol, nucleus, peroxisome | 19.21 | 17.07 |
| Os08t0363900-00 | Rice | cytosol | 18.29 | 16.9 |
| CDX79489 | Canola | cytosol | 14.94 | 15.17 |
| TraesCS2A01G122300.2 | Wheat | plastid | 27.13 | 15.14 |
| TraesCS2B01G144400.2 | Wheat | plastid | 27.13 | 15.11 |
| Zm00001d015990_P001 | Maize | nucleus | 24.39 | 15.09 |
| TraesCS2D01G125000.1 | Wheat | plastid | 26.52 | 14.8 |
| HORVU2Hr1G021360.2 | Barley | plastid | 26.52 | 14.29 |
| KXG30022 | Sorghum | nucleus, plastid | 23.48 | 14.18 |
| CDY64242 | Canola | nucleus | 10.37 | 12.88 |
| CDY54822 | Canola | cytosol, plastid | 19.82 | 11.84 |
| CDY10668 | Canola | nucleus, plastid | 19.51 | 11.15 |
| CDY64240 | Canola | cytosol, plastid | 19.51 | 10.74 |
| CDY67857 | Canola | nucleus, plastid | 19.51 | 10.6 |
| CDY29770 | Canola | nucleus, plastid | 20.43 | 10.36 |
| CDY42785 | Canola | nucleus, plastid | 20.43 | 10.2 |
| CDX74164 | Canola | nucleus | 16.16 | 10.15 |
| CDY54821 | Canola | nucleus | 20.73 | 10.01 |
| CDY40681 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 15.55 | 9.39 |
| CDY10669 | Canola | nucleus | 20.73 | 9.09 |
| CDY06853 | Canola | cytosol, nucleus, plastid | 31.71 | 7.39 |
| CDX92957 | Canola | nucleus, plastid | 21.34 | 5.76 |
| CDX94892 | Canola | nucleus, plastid | 21.04 | 5.56 |
Protein Annotations
| EnsemblPlants:CDY28377 | EnsemblPlantsGene:GSBRNA2T00040191001 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 | ProteinID:CDY28377 | ProteinID:CDY28377.1 |
| SEG:seg | SMART:SM01114 | UniParc:UPI0004EE569C | UniProt:A0A078GTB9 | MapMan:15.5.9 | : |
Description
BnaC01g35470DBnaC01g35470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTB9]
Coordinates
chrLK032218:+:486962..488600
Molecular Weight (calculated)
36633.4 Da
IEP (calculated)
7.515
GRAVY (calculated)
-0.626
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSRTDGERE GNNTDQEGVT GRKQKGCRCR QSKCLKLYCD CFASGVLCND CDCAACHNNT DNSFAREAAV LNLLDRNPNA FNGKPPSFLI NKQAATDTKL
101: GLLSRGCKCK RTKCLKKYCE CFQANALCSD NCKCINCENV SALGATNRHN VGFNTPDNLI CAPQSSLQQW NSCPAPLSSM PDNYILDSLE SPMYSSPKLP
201: YKKKRSRLGC NTPKLVPDLG DLRSLLLAAS ESATANAGLQ DKNRICIKPD DKELWNESES GIVEEEDIQS CGRLIQLIDA QYNDEVDPQT KTRDIYMEQE
301: RAVLETFRDC LHKYMKVGFM KGTNYYHF
101: GLLSRGCKCK RTKCLKKYCE CFQANALCSD NCKCINCENV SALGATNRHN VGFNTPDNLI CAPQSSLQQW NSCPAPLSSM PDNYILDSLE SPMYSSPKLP
201: YKKKRSRLGC NTPKLVPDLG DLRSLLLAAS ESATANAGLQ DKNRICIKPD DKELWNESES GIVEEEDIQS CGRLIQLIDA QYNDEVDPQT KTRDIYMEQE
301: RAVLETFRDC LHKYMKVGFM KGTNYYHF
001: MTGNADSGKI ATEKDPRKLV FTKLEVSPVF RESPVKELPL FPPISREHSE AKDKTDEEGI TSRKHKGCRC KQSKCLKLYC DCFASGVVCT DCDCVDCHNN
101: SEKCDAREAA MVNVLGRNPN AFSEKALGSL TDNQCKAAPD TKPGLLSRGC KCKRTRCLKK YCECFQANLL CSDNCKCINC KNVSEAFQPP AFSAHNSPQV
201: YRRRRDRELT EWNSCPAPLF SIPDNSIQNA LGSPMSCSPK LPYRKKRSLM GYTSTLLPDL GDLCSLLVAA SESATTTAED QNRIFTKPDD KEAIELSSES
301: ESRNVEEEIQ SRGRLIELID VQYNGEEDSQ CKTKTSVNET DIYMEQERAV LETFRDCLQK FIKSRLES
101: SEKCDAREAA MVNVLGRNPN AFSEKALGSL TDNQCKAAPD TKPGLLSRGC KCKRTRCLKK YCECFQANLL CSDNCKCINC KNVSEAFQPP AFSAHNSPQV
201: YRRRRDRELT EWNSCPAPLF SIPDNSIQNA LGSPMSCSPK LPYRKKRSLM GYTSTLLPDL GDLCSLLVAA SESATTTAED QNRIFTKPDD KEAIELSSES
301: ESRNVEEEIQ SRGRLIELID VQYNGEEDSQ CKTKTSVNET DIYMEQERAV LETFRDCLQK FIKSRLES
Arabidopsis Description
TCX8Protein tesmin/TSO1-like CXC 8 [Source:UniProtKB/Swiss-Prot;Acc:Q700D0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.