Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G144400.2 | Wheat | plastid | 95.41 | 95.25 |
| TraesCS2D01G125000.1 | Wheat | plastid | 93.88 | 93.88 |
| HORVU2Hr1G021360.2 | Barley | plastid | 88.95 | 85.88 |
| Os08t0369600-01 | Rice | cytosol, nucleus, peroxisome | 31.63 | 50.41 |
| Os08t0363900-00 | Rice | cytosol | 30.27 | 50.14 |
| TraesCS3A01G304800.1 | Wheat | plastid | 32.31 | 30.89 |
| TraesCS7A01G341100.2 | Wheat | nucleus, plastid | 24.49 | 29.63 |
| CDY19795 | Canola | nucleus | 22.79 | 29.45 |
| Bra036551.1-P | Field mustard | nucleus | 22.62 | 29.17 |
| CDY65712 | Canola | nucleus | 22.11 | 28.38 |
| AT3G16160.1 | Thale cress | nucleus | 17.69 | 28.26 |
| CDY05340 | Canola | nucleus | 22.62 | 27.82 |
| AT5G25790.2 | Thale cress | nucleus | 23.47 | 27.38 |
| CDY28377 | Canola | nucleus | 15.14 | 27.13 |
| Bra009859.1-P | Field mustard | nucleus | 23.47 | 27.11 |
| CDX88196 | Canola | nucleus | 23.47 | 27.06 |
| CDX80536 | Canola | nucleus | 23.64 | 26.78 |
| Bra021165.1-P | Field mustard | nucleus | 14.63 | 26.38 |
| CDY20184 | Canola | cytosol | 15.14 | 26.18 |
| TraesCS3A01G219300.1 | Wheat | nucleus | 10.37 | 25.21 |
| TraesCS5A01G054200.1 | Wheat | nucleus, plastid | 11.39 | 18.77 |
| TraesCS1A01G327100.1 | Wheat | plastid | 10.71 | 16.94 |
| TraesCS4A01G284600.2 | Wheat | nucleus | 16.16 | 11.35 |
| TraesCS5A01G053800.1 | Wheat | nucleus | 13.78 | 10.59 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G122300.2 | EnsemblPlantsGene:TraesCS2A01G122300 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF45 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg | SMART:SM01114 |
| MapMan:15.5.9 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:71666099..71670386
Molecular Weight (calculated)
65241.3 Da
IEP (calculated)
8.948
GRAVY (calculated)
-0.498
Length
588 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNPLNLPPG SVQPNFGSAF YARKPGSAAT AVSLSQALPL WPPVPWPTLM VRKHHMPFPA QPAAKKLQVR RSPVLSQDLP LREALQVAEL PPPRVQLRPL
101: QQAPPVLKQS LPKTEVPVVL PMRATSVDVR WNARYPWSET SCESTDRTSR RKQCKCKNSK CLKKYCECFA SGRYCNDCNC KNCYNNVGHE AARQDAIDAA
201: MERNPMAFMP KIGNIPPHAA QNCEFKVAEG PLVGKHTKGC HCKRSECLKK YCECFRSNIL CSENCKCMDC KNYESNEDRK AIRRITRHQQ HLVYAHHMQN
301: PAIMGITGPY AALSPAAEKL SNLSVASSGR DQLISNNDSS QVTSSLLTPV PIEGTKSAVK VEPHGVTYRP LLADVIQIEN VNELCKVLLL VSRQAAGASV
401: GVKENINRRK IDRADSCLSS INHDTEAVEK QRDEQVCLTE NSLTAVPVSE VRAGTPRYDP TNTCKYDRRP VSPETQELMC NEQDRLFLTP SVAAVIPSAT
501: KQRLPDTYKE QEKRILKTLH DYLGELVNCG RLHEEKLSLM SSKFLHERTS VGSSCGSSSI SRVTEVARVG QTIRQSLHSP ASVKSPGL
101: QQAPPVLKQS LPKTEVPVVL PMRATSVDVR WNARYPWSET SCESTDRTSR RKQCKCKNSK CLKKYCECFA SGRYCNDCNC KNCYNNVGHE AARQDAIDAA
201: MERNPMAFMP KIGNIPPHAA QNCEFKVAEG PLVGKHTKGC HCKRSECLKK YCECFRSNIL CSENCKCMDC KNYESNEDRK AIRRITRHQQ HLVYAHHMQN
301: PAIMGITGPY AALSPAAEKL SNLSVASSGR DQLISNNDSS QVTSSLLTPV PIEGTKSAVK VEPHGVTYRP LLADVIQIEN VNELCKVLLL VSRQAAGASV
401: GVKENINRRK IDRADSCLSS INHDTEAVEK QRDEQVCLTE NSLTAVPVSE VRAGTPRYDP TNTCKYDRRP VSPETQELMC NEQDRLFLTP SVAAVIPSAT
501: KQRLPDTYKE QEKRILKTLH DYLGELVNCG RLHEEKLSLM SSKFLHERTS VGSSCGSSSI SRVTEVARVG QTIRQSLHSP ASVKSPGL
001: MGEGEEGDKF PPKTDEVTQE SMKSARQLDF TGGSSDVEHS HSNQASSMAA ASIPSPIVTV TRPIITSQAP PTVATPIPPP PQSQGIILHV PIRHPRPESP
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT ANGVSQTAKQ PSQLTTTTTT PNTSSQTHLH KTPALSEKKD L
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT ANGVSQTAKQ PSQLTTTTTT PNTSSQTHLH KTPALSEKKD L
Arabidopsis Description
Tesmin/TSO1-like CXC domain-containing protein [Source:TAIR;Acc:AT2G20110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.