Factsheet for Os08t0363900-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 2
plastid 1
cytosol 2
plasma membrane 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane
PProwler:	mitochondrion
TargetP:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0369600-01	Rice	cytosol, nucleus, peroxisome	94.08	90.51
TraesCS2A01G122300.2	Wheat	plastid	50.14	30.27
Os03t0638300-01	Rice	cytosol	9.58	30.09
TraesCS2B01G144400.2	Wheat	plastid	49.58	29.88
TraesCS2D01G125000.1	Wheat	plastid	49.3	29.76
HORVU2Hr1G021360.2	Barley	plastid	50.7	29.56
Os06t0332700-00	Rice	nucleus	23.66	27.72
AT3G16160.1	Thale cress	nucleus	20.28	19.57
CDY19795	Canola	nucleus	24.51	19.12
Bra036551.1-P	Field mustard	nucleus	24.51	19.08
CDX80536	Canola	nucleus	27.04	18.5
CDY28377	Canola	nucleus	16.9	18.29
CDY65712	Canola	nucleus	23.38	18.12
Bra009859.1-P	Field mustard	nucleus	25.92	18.07
CDX88196	Canola	nucleus	25.92	18.04
Bra021165.1-P	Field mustard	nucleus	16.34	17.79
CDY20184	Canola	cytosol	16.9	17.65
CDY05340	Canola	nucleus	23.66	17.57
Os01t0761100-01	Rice	cytosol, nucleus, plastid	29.86	17.12
Os02t0274600-00	Rice	cytosol, nucleus	20.56	16.7
AT5G25790.2	Thale cress	nucleus	23.38	16.47
Os12t0605300-01	Rice	nucleus	14.37	12.53
Os05t0509400-01	Rice	cytosol, nucleus, plasma membrane, plastid	12.68	12.03
Os07t0176200-01	Rice	nucleus	20.85	9.46
Os12t0605500-01	Rice	nucleus	18.87	8.82

Protein Annotations

EnsemblPlants:Os08t0363900-00	EnsemblPlantsGene:Os08g0363900	InterPro:CRC	InterPro:IPR005172	InterPro:Lin-54_fam	InterPro:Tesmin/TSO1-like_CXC
PANTHER:PTHR12446	PANTHER:PTHR12446:SF45	PFAM:PF03638	PFscan:PS51634	ProteinID:BAT05125.1	SEG:seg
SMART:SM01114	UniParc:UPI000393889A	UniProt:A0A0P0XF74	MapMan:15.5.9	:	:

Description

Hypothetical conserved gene. (Os08t0363900-00)

Coordinates

chr8:+:16845951..16849354

Molecular Weight (calculated)

39012.7 Da

IEP (calculated)

8.764

GRAVY (calculated)

-0.434

Length

355 amino acids

Sequence
(BLAST)

001: LRPGSVKIDF ASSLYAAKAD IAATAAALSH ALGPPCYQLP LAKVNSSLPL WPPVTCPSTF AQKRRMSLPS PPPAKKLQVQ QSSSILPQDF PKLEVLPVEK
101: PTKLQERRSP QHVSPELKQG SPKMERPLLP RPATFIDVML SSQKPSSDMW SETKDVTLTR KTNCSCKYSK CLKLYCECFE KGRYCIGCNC TNCCNNVNHE
201: NARHDAINVA LERNPAAFMP KVSNSTAHNC ESKAAEGDIV GKHTKGCKCK RTEYLKKYCE CFKASVFCSE NCRCTGCKNF KSNEDRISQK NTVHAHNVQN
301: PASSGMVGQS VIIFHAAEND SSLSLAASVS DHSINNNTSH VILLQHTFQI CHGPC

Best Arabidopsis Sequence Match ( AT2G20110.3 )
(BLAST)

001: MGEGEEGDKF PPKTDEVTQE SMKSARQLDF TGGSSDVEHS HSNQASSMAA ASIPSPIVTV TRPIITSQAP PTVATPIPPP PQSQGIILHV PIRHPRPESP
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT HLHKTPALSE KKDL

Arabidopsis Description

Tesmin/TSO1-like CXC domain-containing protein [Source:TAIR;Acc:AT2G20110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.