Factsheet for Os05t0509400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 2
cytosol 1
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19781	Sorghum	cytosol	78.88	82.17
Zm00001d038660_P003	Maize	nucleus	77.27	80.28
TraesCS1A01G327100.1	Wheat	plastid	79.14	79.57
TraesCS1D01G329200.1	Wheat	plastid	79.41	79.41
TraesCS1B01G340500.1	Wheat	cytosol, plastid	79.14	79.14
HORVU1Hr1G078000.1	Barley	plastid	80.48	72.88
Zm00001d010713_P006	Maize	cytosol	67.65	69.32
Os12t0605300-01	Rice	nucleus	40.11	36.85
Os03t0638300-01	Rice	cytosol	10.7	35.4
Os06t0332700-00	Rice	nucleus	16.58	20.46
CDX79489	Canola	cytosol	16.84	19.5
Os02t0274600-00	Rice	cytosol, nucleus	17.11	14.65
Bra001128.1-P	Field mustard	nucleus	19.79	14.2
CDX74164	Canola	nucleus	19.79	14.18
Os08t0369600-01	Rice	cytosol, nucleus, peroxisome	13.64	13.82
Os12t0605500-01	Rice	nucleus	27.81	13.68
CDY40681	Canola	mitochondrion, plasma membrane, plastid, vacuole	19.25	13.26
Os07t0176200-01	Rice	nucleus	27.27	13.04
AT3G04850.1	Thale cress	cytosol	21.66	12.68
Os08t0363900-00	Rice	cytosol	12.03	12.68
Os01t0761100-01	Rice	cytosol, nucleus, plastid	18.45	11.15

Protein Annotations

EMBL:AK108053	EnsemblPlants:Os05t0509400-01	EnsemblPlantsGene:Os05g0509400	EntrezGene:4339273	InterPro:CRC	InterPro:IPR005172
InterPro:Lin-54_fam	InterPro:Tesmin/TSO1-like_CXC	PANTHER:PTHR12446	PANTHER:PTHR12446:SF44	PFAM:PF03638	PFscan:PS51634
ProteinID:AAT44270.1	ProteinID:BAF17916.1	ProteinID:BAS94822.1	RefSeq:XP_015640211.1	SEG:seg	SMART:SM01114
UniParc:UPI00003A9276	UniProt:Q6L4W5	MapMan:15.5.9	:	:	:

Description

OsCPP5, CPP5Similar to DNA binding protein-like. (Os05t0509400-01)

Coordinates

chr5:-:25224888..25227403

Molecular Weight (calculated)

41414.2 Da

IEP (calculated)

8.148

GRAVY (calculated)

-0.634

Length

374 amino acids

Sequence
(BLAST)

001: MEATPISVKP PSPVAAAPPP PPVQVPVPPP PPPPLPPAAA AVEPLPPQPV AVVVAEAEPC SMNQLALTPT PKRQKVEESA DGNGCKHCAC KKSRCLKLYC
101: PCFAGGGYCS EKCGCQPCFN KALYAETVQT TRKVLLSRQK RMSLKINRRS EANAEAVEDA HHSSSSTPPR RGCNCKKSSC LKKYCDCYQD GTGCSLFCRC
201: EDCRNPFGKN EGIMAEESKR FLYTGADLDH SEDEQDFIVE RSPRLQSPIS KESSFQQTPP HIRATNRDTH MFPQAISQWQ PRSWHCSKRQ SNDRVIDDSG
301: EYKNSNHDWQ LAKPEDSYSI SRCVQILNGM AELSQVEKSV APDVFLQAGN REIFISLNGD VRALWLKRKI QNLT

Best Arabidopsis Sequence Match ( AT3G22760.1 )
(BLAST)

001: MDTPEKSETQ IGTPVSKLKV EDSPVFSYIC NLSPIKTIKP IPITCPLSSL NYASPPSVFT SPHAVSHKES RFRSQKDVSA SKEVGEEEAL VGSEPEQSYK
101: NDCNTPRVTN DVKDNGCGKD LQVMMDNVKK KSDTPDWETL IAATTELIYG SPRESEAFSC LLKKTSNSEA RLRGSITATS VAVTNTDVVN NESESVDALS
201: ILHRGVRRRC LDFEVKGNNQ QTLGESSSSC VVPSIGLHLN TIAMSSKDKN VANEYSFSGN IKVGVQSSLT PVLHSQHDIV RENESGKDSG QIIEVVPKSL
301: ASVDLTPISP KKKRRKSEQS GEGDSSCKRC NCKKSKCLKL YCECFAAGFY CIEPCSCINC FNKPIHKDVV LATRKQIESR NPLAFAPKVI RNSDSIIEVG
401: EDASKTPASA RHKRGCNCKK SNCLKKYCEC YQGGVGCSIN CRCEGCKNAF GRKDGSLFEQ DEENETSGTP GTKKTQQNVE LFKPAAPPST PIPFRQPLAQ
501: LPISSNNRLL PPQSHFHHGA IGSSSSGIYN IRKPDMSLLS HSRIETITED IDDMSENLIH SPITTLSPNS KRVSLSHLDS PESTPWRRNG GGRNLIRSFP
601: TFPSLTPHH

Arabidopsis Description

TCX3Protein tesmin/TSO1-like CXC 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.