Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G329200.1 | Wheat | plastid | 85.23 | 94.12 |
| TraesCS1B01G340500.1 | Wheat | cytosol, plastid | 85.23 | 94.12 |
| TraesCS1A01G327100.1 | Wheat | plastid | 83.78 | 93.01 |
| Os05t0509400-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 72.88 | 80.48 |
| EES19781 | Sorghum | cytosol | 68.28 | 78.55 |
| Zm00001d038660_P003 | Maize | nucleus | 67.07 | 76.94 |
| Zm00001d010713_P006 | Maize | cytosol | 60.29 | 68.22 |
| HORVU5Hr1G013160.11 | Barley | nucleus, plastid | 35.11 | 35.45 |
| HORVU7Hr1G081540.1 | Barley | plastid | 14.77 | 20.89 |
| CDX79489 | Canola | cytosol | 15.01 | 19.2 |
| Bra001128.1-P | Field mustard | nucleus | 17.92 | 14.2 |
| CDX74164 | Canola | nucleus | 17.92 | 14.18 |
| HORVU5Hr1G012950.1 | Barley | nucleus | 25.91 | 13.97 |
| CDY40681 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 17.92 | 13.63 |
| AT3G04850.1 | Thale cress | cytosol | 19.61 | 12.68 |
| HORVU4Hr1G004280.15 | Barley | nucleus, plastid | 27.36 | 12.24 |
| HORVU3Hr1G073470.1 | Barley | cytosol, nucleus, plastid | 16.22 | 10.95 |
| HORVU2Hr1G021360.2 | Barley | plastid | 14.77 | 10.02 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G078000.1 | EnsemblPlantsGene:HORVU1Hr1G078000 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF44 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg | SMART:SM01114 |
| UniParc:UPI000B460198 | UniProt:A0A287GCS9 | MapMan:15.5.9 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:518997434..519000375
Molecular Weight (calculated)
45531.1 Da
IEP (calculated)
8.568
GRAVY (calculated)
-0.738
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: PRHSLKRGPS HLLPPSRTRV CVPSPSPPPP PPPPRAPPME ATPISVKPPS PAPPPPPHPH LTAAVPLSVM EPPPSPPPAV AAAEGPPEAH ADPGSMNQLA
101: LATTPKRQKV EDAADGCKHC ACKKSRCLKL YCPCFAGGGY CSEKCGCVPC FNKADFAETV QTTRKVLLSR QKRMSLKINR RLEANAETME DAHNSSSSTP
201: PRRGCNCKKS SCLKKYCDCY QDGTGCSLFC RCEDCKNPFG KNEGIMADES KRFLYTGADL DHSEDEHDFI VERSPRLQSP ISKESSFQHT PPRSKASSRD
301: THLLPQVLSQ WQPRSWQQQS SKRQANDHHR AVDDSGENRG SNHEWQLAKH QAPEDAYSIS RCVQILNGMV EMSQVEKSVA PDVFLQPGNR EIFVSLGVDV
401: RALWLKRKIQ HLT
101: LATTPKRQKV EDAADGCKHC ACKKSRCLKL YCPCFAGGGY CSEKCGCVPC FNKADFAETV QTTRKVLLSR QKRMSLKINR RLEANAETME DAHNSSSSTP
201: PRRGCNCKKS SCLKKYCDCY QDGTGCSLFC RCEDCKNPFG KNEGIMADES KRFLYTGADL DHSEDEHDFI VERSPRLQSP ISKESSFQHT PPRSKASSRD
301: THLLPQVLSQ WQPRSWQQQS SKRQANDHHR AVDDSGENRG SNHEWQLAKH QAPEDAYSIS RCVQILNGMV EMSQVEKSVA PDVFLQPGNR EIFVSLGVDV
401: RALWLKRKIQ HLT
001: MMDNVKKKSD TPDWETLIAA TTELIYGSPR ESEAFSCLLK KTSNSEARLR GSITATSVAV TNTDVVNNES ESVDALSILH RGVRRRCLDF EVKGNNQQTL
101: GESSSSCVVP SIGLHLNTIA MSSKDKNVAN EYSFSGNIKV GVQSSLTPVL HSQHDIVREN ESGKDSGQII EVVPKSLASV DLTPISPKKK RRKSEQSGEG
201: DSSCKRCNCK KSKCLKLYCE CFAAGFYCIE PCSCINCFNK PIHKDVVLAT RKQIESRNPL AFAPKVIRNS DSIIEVGEDA SKTPASARHK RGCNCKKSNC
301: LKKYCECYQG GVGCSINCRC EGCKNAFGRK DGSLFEQDEE NETSGTPGTK KTQQNVELFK PAAPPSTPIP FRQPLAQLPI SSNNRLLPPQ SHFHHGAIGS
401: SSSGIYNIRK PDMSLLSHSR IETITEDIDD MSENLIHSPI TTLSPNSKRV SLSHLDSPES TPWRRNGGGR NLIRSFPTFP SLTPHH
101: GESSSSCVVP SIGLHLNTIA MSSKDKNVAN EYSFSGNIKV GVQSSLTPVL HSQHDIVREN ESGKDSGQII EVVPKSLASV DLTPISPKKK RRKSEQSGEG
201: DSSCKRCNCK KSKCLKLYCE CFAAGFYCIE PCSCINCFNK PIHKDVVLAT RKQIESRNPL AFAPKVIRNS DSIIEVGEDA SKTPASARHK RGCNCKKSNC
301: LKKYCECYQG GVGCSINCRC EGCKNAFGRK DGSLFEQDEE NETSGTPGTK KTQQNVELFK PAAPPSTPIP FRQPLAQLPI SSNNRLLPPQ SHFHHGAIGS
401: SSSGIYNIRK PDMSLLSHSR IETITEDIDD MSENLIHSPI TTLSPNSKRV SLSHLDSPES TPWRRNGGGR NLIRSFPTFP SLTPHH
Arabidopsis Description
TCX3Protein tesmin/TSO1-like CXC 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L548]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.