Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G304800.1 | Wheat | plastid | 94.93 | 94.47 |
| TraesCS3D01G297000.1 | Wheat | plastid | 94.61 | 94.15 |
| TraesCS3B01G331700.1 | Wheat | plastid | 93.95 | 93.5 |
| Os01t0761100-01 | Rice | cytosol, nucleus, plastid | 75.49 | 74.64 |
| KXG33424 | Sorghum | nucleus | 72.22 | 72.1 |
| Zm00001d012688_P001 | Maize | nucleus | 71.08 | 70.85 |
| Zm00001d043378_P001 | Maize | nucleus | 68.14 | 68.25 |
| CDY44573 | Canola | cytosol | 13.56 | 58.45 |
| Bra025590.1-P | Field mustard | cytosol | 13.56 | 58.45 |
| GSMUA_Achr9P06330_001 | Banana | cytosol | 42.32 | 51.19 |
| GSMUA_Achr2P09150_001 | Banana | cytosol | 41.5 | 48.66 |
| GSMUA_Achr6P26760_001 | Banana | nucleus | 43.3 | 47.58 |
| PGSC0003DMT400000824 | Potato | plastid | 37.91 | 47.54 |
| Solyc12g007180.1.1 | Tomato | nucleus | 38.07 | 46.79 |
| VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 39.22 | 45.8 |
| KRH41552 | Soybean | nucleus | 41.18 | 45.73 |
| KRH39300 | Soybean | nucleus | 41.67 | 45.62 |
| KRH48373 | Soybean | nucleus | 41.67 | 45.37 |
| KRH60264 | Soybean | nucleus | 41.34 | 45.1 |
| HORVU7Hr1G081540.1 | Barley | plastid | 21.24 | 44.52 |
| GSMUA_Achr3P31550_001 | Banana | nucleus | 41.83 | 43.76 |
| AT4G29000.1 | Thale cress | nucleus | 39.54 | 40.13 |
| AT2G20110.2 | Thale cress | nucleus | 37.75 | 39.97 |
| HORVU2Hr1G021360.2 | Barley | plastid | 31.21 | 31.36 |
| HORVU5Hr1G013160.11 | Barley | nucleus, plastid | 12.09 | 18.09 |
| HORVU1Hr1G078000.1 | Barley | plastid | 10.95 | 16.22 |
| HORVU5Hr1G012950.1 | Barley | nucleus | 14.54 | 11.62 |
| HORVU4Hr1G004280.15 | Barley | nucleus, plastid | 15.03 | 9.97 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G073470.1 | EnsemblPlantsGene:HORVU3Hr1G073470 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg | SMART:SM01114 |
| UniParc:UPI000B47DCE6 | UniProt:A0A287LMU5 | MapMan:15.5.9 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:553609683..553622869
Molecular Weight (calculated)
66418.4 Da
IEP (calculated)
9.173
GRAVY (calculated)
-0.630
Length
612 amino acids
Sequence
(BLAST)
(BLAST)
001: KEQAGAGGSG AGGAPPPRVP VPAVSTQPPI KKLVRQLDFN YGNPAMAAAA AAVSRSVPPR ALQVGYPQPH QLRAALPMGV PHQLQPRGLP VMRPHQMVHA
101: QLPRPALPMA MPVPVPQARS ALSQPVQRPP VAVPLKPESP KPRGRLYDGK DGTPTKKKCC NCRHSKCLKL YCECFASGIY CDGCNCTNCF NNVENEVARR
201: EAIEATLERN PDAFRPKIGS SPHTNRNNME VAGDLPLIGK HNKGCHCKKS GCLKKYCECF QANILCSENC KCRDCKNFDG SEDRKHLSLD HKNVVHMQQA
301: ANAAVNGAIG ATAFSSPSTS KKRKHIDSSL DLSTKEHLAM RNGQLSQVIY QKNAMASDGS LPVGQSVHPH MMGPFKVTYR PLLADIIQPG DVKELCKLLV
401: TVSGQAAKAY TGRKIQEEKV AEKEDGTGGS LASTNHDREG KTQDQNHRKT SIDDRSSVGT DMGKASLDDS RPDCNDDQKS SRPMSPGTLA LMCDEQDAMF
501: ATSQNAVAPP AVAADQNRSE LYAEQERCVL TEFRDCLRKL VQYGRMKEEK YSMAIRSEAT GHPGQVNGAP RIPYPKVDVP VVKTFPQSSS KHLVAGNPSS
601: GHLDKRLKPE NT
101: QLPRPALPMA MPVPVPQARS ALSQPVQRPP VAVPLKPESP KPRGRLYDGK DGTPTKKKCC NCRHSKCLKL YCECFASGIY CDGCNCTNCF NNVENEVARR
201: EAIEATLERN PDAFRPKIGS SPHTNRNNME VAGDLPLIGK HNKGCHCKKS GCLKKYCECF QANILCSENC KCRDCKNFDG SEDRKHLSLD HKNVVHMQQA
301: ANAAVNGAIG ATAFSSPSTS KKRKHIDSSL DLSTKEHLAM RNGQLSQVIY QKNAMASDGS LPVGQSVHPH MMGPFKVTYR PLLADIIQPG DVKELCKLLV
401: TVSGQAAKAY TGRKIQEEKV AEKEDGTGGS LASTNHDREG KTQDQNHRKT SIDDRSSVGT DMGKASLDDS RPDCNDDQKS SRPMSPGTLA LMCDEQDAMF
501: ATSQNAVAPP AVAADQNRSE LYAEQERCVL TEFRDCLRKL VQYGRMKEEK YSMAIRSEAT GHPGQVNGAP RIPYPKVDVP VVKTFPQSSS KHLVAGNPSS
601: GHLDKRLKPE NT
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.