Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P06330_001 | Banana | cytosol | 73.37 | 75.69 |
| GSMUA_Achr6P26760_001 | Banana | nucleus | 70.69 | 66.25 |
| Bra025590.1-P | Field mustard | cytosol | 16.67 | 61.27 |
| CDY44573 | Canola | cytosol | 16.67 | 61.27 |
| VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 52.49 | 52.29 |
| GSMUA_Achr3P31550_001 | Banana | nucleus | 56.7 | 50.6 |
| PGSC0003DMT400000824 | Potato | plastid | 45.4 | 48.57 |
| Solyc12g007180.1.1 | Tomato | nucleus | 44.83 | 46.99 |
| KRH60264 | Soybean | nucleus | 49.81 | 46.35 |
| KRH41552 | Soybean | nucleus | 48.85 | 46.28 |
| KRH39300 | Soybean | nucleus | 49.43 | 46.15 |
| KRH48373 | Soybean | nucleus | 49.04 | 45.55 |
| Os01t0761100-01 | Rice | cytosol, nucleus, plastid | 51.92 | 43.78 |
| Zm00001d012688_P001 | Maize | nucleus | 50.57 | 43.0 |
| KXG33424 | Sorghum | nucleus | 49.43 | 42.09 |
| TraesCS3A01G304800.1 | Wheat | plastid | 49.04 | 41.63 |
| TraesCS3D01G297000.1 | Wheat | plastid | 49.04 | 41.63 |
| HORVU3Hr1G073470.1 | Barley | cytosol, nucleus, plastid | 48.66 | 41.5 |
| TraesCS3B01G331700.1 | Wheat | plastid | 48.85 | 41.46 |
| Zm00001d043378_P001 | Maize | nucleus | 48.47 | 41.41 |
| AT4G29000.1 | Thale cress | nucleus | 47.7 | 41.29 |
| AT2G20110.2 | Thale cress | nucleus | 42.53 | 38.41 |
| GSMUA_Achr2P17070_001 | Banana | nucleus | 17.62 | 14.77 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 16.67 | 11.79 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 17.82 | 11.22 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 16.86 | 10.93 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P09150_001 | EnsemblPlants:GSMUA_Achr2T09150_001 | EnsemblPlantsGene:GSMUA_Achr2G09150_001 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam |
| InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg |
| SMART:SM01114 | UniParc:UPI0002966BC7 | UniProt:M0S6F6 | MapMan:15.5.9 | : | : |
Description
tesmin/TSO1-like CXC domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G09150_001]
Coordinates
chr2:-:12898689..12904622
Molecular Weight (calculated)
57705.4 Da
IEP (calculated)
8.098
GRAVY (calculated)
-0.667
Length
522 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQSISYITV EKLLSLPDVS VYYCFLLQRR AHYLTTNLSR KPASPKSRPR PLHDAKDGTP TRKKNCNCKH SKCLKLYCEC FASGVYCDGC NCANCCNNIE
101: NEAARREAVE ATLERNPNAF RPKIGSSPHT LRDSRDEAGE LPLVGKHNKG CHCKKSGCLK KYCECFQANI LCSDNCKCMD CKNFEGSEER KALFRGDHGS
201: ILYMQQATNA ALNGAIGPSG FMSPSAPRKR KNQVLLAGAS VKDQPTQRLA QIPQANASAS GSSFASIPVA CAINTAPAAS TKVTYRSLLA DIVQPEHVRD
301: LCKLLVVVSG EVAKTFSDRR VQERLEEKEG QDESSLRPPN HDRDQSQKDP DMQNALVDEY SSGIPIDKTN TEESGSDSGD GQKGERSMSP GTLALMCDEQ
401: DTIFMTSRAT GTAPRSSNDQ SMSEVYAEQE RCVLMEFRDY LHKLVTYGRM KEEKYSSMSA KYETPYHMES PQNAAARTTM PTAMEMPQML KPIPAYPNKH
501: TPIRQAAIGN GDIKPKIEKS DT
101: NEAARREAVE ATLERNPNAF RPKIGSSPHT LRDSRDEAGE LPLVGKHNKG CHCKKSGCLK KYCECFQANI LCSDNCKCMD CKNFEGSEER KALFRGDHGS
201: ILYMQQATNA ALNGAIGPSG FMSPSAPRKR KNQVLLAGAS VKDQPTQRLA QIPQANASAS GSSFASIPVA CAINTAPAAS TKVTYRSLLA DIVQPEHVRD
301: LCKLLVVVSG EVAKTFSDRR VQERLEEKEG QDESSLRPPN HDRDQSQKDP DMQNALVDEY SSGIPIDKTN TEESGSDSGD GQKGERSMSP GTLALMCDEQ
401: DTIFMTSRAT GTAPRSSNDQ SMSEVYAEQE RCVLMEFRDY LHKLVTYGRM KEEKYSSMSA KYETPYHMES PQNAAARTTM PTAMEMPQML KPIPAYPNKH
501: TPIRQAAIGN GDIKPKIEKS DT
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.