Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025590.1-P | Field mustard | cytosol | 15.21 | 62.68 |
| CDY44573 | Canola | cytosol | 15.21 | 62.68 |
| GSMUA_Achr9P06330_001 | Banana | cytosol | 50.6 | 58.5 |
| GSMUA_Achr2P09150_001 | Banana | cytosol | 50.6 | 56.7 |
| GSMUA_Achr6P26760_001 | Banana | nucleus | 50.77 | 53.32 |
| VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 43.76 | 48.85 |
| PGSC0003DMT400000824 | Potato | plastid | 38.8 | 46.52 |
| KRH41552 | Soybean | nucleus | 43.59 | 46.28 |
| KRH60264 | Soybean | nucleus | 43.93 | 45.81 |
| KRH39300 | Soybean | nucleus | 43.59 | 45.62 |
| Solyc12g007180.1.1 | Tomato | nucleus | 38.46 | 45.18 |
| KRH48373 | Soybean | nucleus | 42.91 | 44.66 |
| Os01t0761100-01 | Rice | cytosol, nucleus, plastid | 46.15 | 43.62 |
| HORVU3Hr1G073470.1 | Barley | cytosol, nucleus, plastid | 43.76 | 41.83 |
| TraesCS3A01G304800.1 | Wheat | plastid | 43.25 | 41.14 |
| Zm00001d012688_P001 | Maize | nucleus | 43.08 | 41.04 |
| TraesCS3B01G331700.1 | Wheat | plastid | 43.08 | 40.98 |
| TraesCS3D01G297000.1 | Wheat | plastid | 43.08 | 40.98 |
| KXG33424 | Sorghum | nucleus | 42.91 | 40.95 |
| AT2G20110.2 | Thale cress | nucleus | 40.17 | 40.66 |
| AT4G29000.1 | Thale cress | nucleus | 41.71 | 40.46 |
| Zm00001d043378_P001 | Maize | nucleus | 42.22 | 40.43 |
| GSMUA_Achr2P17070_001 | Banana | nucleus | 14.19 | 13.32 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 14.19 | 11.25 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 15.56 | 10.98 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 14.87 | 10.81 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P31550_001 | EnsemblPlants:GSMUA_Achr3T31550_001 | EnsemblPlantsGene:GSMUA_Achr3G31550_001 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam |
| InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51257 | PFscan:PS51634 |
| SEG:seg | SMART:SM01114 | UniParc:UPI000295D9BD | UniProt:M0SJG9 | MapMan:15.5.9 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G31550_001]
Coordinates
chr3:-:29807809..29815542
Molecular Weight (calculated)
63896.8 Da
IEP (calculated)
8.234
GRAVY (calculated)
-0.477
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQGNRSAST ASGYTSGSCH RGPRATATAA AAPAATADAG AASASGLSPL NSVAHVSSYL TVILSNLPFV CSSEQESLKK RLRPMYETKD GTPRTKNCNC
101: KHSRCLKLYC ECFASGVYCD GCNCTNCCNN VENEAARHDA VEATLERNPN AFRPKIGSSP HATRDIRPKN RMITLSRKSA FKFIQQLNVY FLIQNRRDEV
201: GELLVGKHNK GCHCKKSGCL KKYCECFQAN ILCSDNCKCM DCKNFEGSEE RKALFHSNHG STLYMQQANA AIKGAIGPSG FISPSSKRRR HQSLVVGNSL
301: KDRSIHRLAQ LPQANHPKTL IPSSSSFASD IVTDAVGPTP VVPAKVTYRS LLADVVQLEH VRDLCKLLVV VSGHVAKTFQ DREAQEKVVK KDDQVETCLA
401: SPIHDGELRQ IDPNSQLASA GDVSNGISAH KMDAEVHKSD CEDEHKAQRP MSPGTLALMC DEQDTMFMTS QHASTTLTYR CDQNISEVCA EQERCVLMEF
501: RDYLRKIVTH GRMKEERYAS MAGKSGTSGF QRLAMTSAAG APTVAAEPPE TPKPVIANSN NHQPVRWPIT SDGDTKPVVV EHSEI
101: KHSRCLKLYC ECFASGVYCD GCNCTNCCNN VENEAARHDA VEATLERNPN AFRPKIGSSP HATRDIRPKN RMITLSRKSA FKFIQQLNVY FLIQNRRDEV
201: GELLVGKHNK GCHCKKSGCL KKYCECFQAN ILCSDNCKCM DCKNFEGSEE RKALFHSNHG STLYMQQANA AIKGAIGPSG FISPSSKRRR HQSLVVGNSL
301: KDRSIHRLAQ LPQANHPKTL IPSSSSFASD IVTDAVGPTP VVPAKVTYRS LLADVVQLEH VRDLCKLLVV VSGHVAKTFQ DREAQEKVVK KDDQVETCLA
401: SPIHDGELRQ IDPNSQLASA GDVSNGISAH KMDAEVHKSD CEDEHKAQRP MSPGTLALMC DEQDTMFMTS QHASTTLTYR CDQNISEVCA EQERCVLMEF
501: RDYLRKIVTH GRMKEERYAS MAGKSGTSGF QRLAMTSAAG APTVAAEPPE TPKPVIANSN NHQPVRWPIT SDGDTKPVVV EHSEI
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.