Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P09150_001 | Banana | cytosol | 75.69 | 73.37 |
| GSMUA_Achr6P26760_001 | Banana | nucleus | 74.51 | 67.68 |
| Bra025590.1-P | Field mustard | cytosol | 16.8 | 59.86 |
| CDY44573 | Canola | cytosol | 16.8 | 59.86 |
| VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 54.55 | 52.67 |
| GSMUA_Achr3P31550_001 | Banana | nucleus | 58.5 | 50.6 |
| PGSC0003DMT400000824 | Potato | plastid | 48.42 | 50.2 |
| Solyc12g007180.1.1 | Tomato | nucleus | 47.83 | 48.59 |
| KRH39300 | Soybean | nucleus | 52.57 | 47.59 |
| KRH41552 | Soybean | nucleus | 51.19 | 47.01 |
| KRH60264 | Soybean | nucleus | 51.98 | 46.88 |
| KRH48373 | Soybean | nucleus | 51.58 | 46.44 |
| Os01t0761100-01 | Rice | cytosol, nucleus, plastid | 54.35 | 44.43 |
| TraesCS3D01G297000.1 | Wheat | plastid | 52.37 | 43.09 |
| TraesCS3A01G304800.1 | Wheat | plastid | 51.78 | 42.6 |
| TraesCS3B01G331700.1 | Wheat | plastid | 51.58 | 42.44 |
| HORVU3Hr1G073470.1 | Barley | cytosol, nucleus, plastid | 51.19 | 42.32 |
| Zm00001d012688_P001 | Maize | nucleus | 50.59 | 41.69 |
| KXG33424 | Sorghum | nucleus | 50.4 | 41.6 |
| Zm00001d043378_P001 | Maize | nucleus | 50.0 | 41.41 |
| AT4G29000.1 | Thale cress | nucleus | 48.02 | 40.3 |
| AT2G20110.2 | Thale cress | nucleus | 44.07 | 38.58 |
| GSMUA_Achr2P17070_001 | Banana | nucleus | 17.79 | 14.45 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 17.59 | 12.06 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 18.18 | 11.1 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 17.0 | 10.68 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P06330_001 | EnsemblPlants:GSMUA_Achr9T06330_001 | EnsemblPlantsGene:GSMUA_Achr9G06330_001 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam |
| InterPro:Tesmin/TSO1-like_CXC | ncoils:Coil | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 |
| SEG:seg | SMART:SM01114 | UniParc:UPI00029568C9 | UniProt:M0TXZ2 | MapMan:15.5.9 | : |
Description
tesmin/TSO1-like CXC domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G06330_001]
Coordinates
chr9:+:4051673..4057836
Molecular Weight (calculated)
55381.4 Da
IEP (calculated)
7.879
GRAVY (calculated)
-0.641
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTFVIFTNC KGLAHNFTMI HFSKTESPKS RPRLLYDAKD GTPTRKKNCN CKHSKCLKLY CECFASGVYC DGCNCSNCCN NVENEAARHE AVEATLERNP
101: NAFRPKIGSS PHASRDGRDE AGELPLVGKH NKGCHCKKSG CLKKYCECFQ ANILCSDNCK CMDCKNFEGS EERKALFRGD HGSALYMQQA ANASLNGAIG
201: PSAFMSPSAS RKRKNQELFF GASIKDQPTK RLTQLPQART SSPASCSAST PAASAINTAP MASTKVTYRS LLADVVQPEH IRDLCKLLVM VSGEVAKTFA
301: DRKVQEKLAE KESQVESSLV PSEQEIDQRQ KDADMQKASV DEHSSGIPAE KTSMEESESD CGDEQKGGRP MSPGTLALLC DEQDTVFMTS QATGTTPRSS
401: NNHNTSEVYA EQERCVLTEF RDYLLKLVTY GRMKEEKYSS MSSKCEVSPC HMVSAPNGVA RGAVPAAAEK SQTVKLVPPN SNKYPSVEQQ TIGNGDIKPK
501: IEKPEM
101: NAFRPKIGSS PHASRDGRDE AGELPLVGKH NKGCHCKKSG CLKKYCECFQ ANILCSDNCK CMDCKNFEGS EERKALFRGD HGSALYMQQA ANASLNGAIG
201: PSAFMSPSAS RKRKNQELFF GASIKDQPTK RLTQLPQART SSPASCSAST PAASAINTAP MASTKVTYRS LLADVVQPEH IRDLCKLLVM VSGEVAKTFA
301: DRKVQEKLAE KESQVESSLV PSEQEIDQRQ KDADMQKASV DEHSSGIPAE KTSMEESESD CGDEQKGGRP MSPGTLALLC DEQDTVFMTS QATGTTPRSS
401: NNHNTSEVYA EQERCVLTEF RDYLLKLVTY GRMKEEKYSS MSSKCEVSPC HMVSAPNGVA RGAVPAAAEK SQTVKLVPPN SNKYPSVEQQ TIGNGDIKPK
501: IEKPEM
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.