Factsheet for Bra025590.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44573	Canola	cytosol	100.0	100.0
Bra011075.1-P	Field mustard	nucleus	79.58	21.4
Bra041042.1-P	Field mustard	nucleus	70.42	19.88
Bra024171.1-P	Field mustard	nucleus	72.54	18.66
Bra010348.1-P	Field mustard	nucleus	75.35	18.64
GSMUA_Achr9P06330_001	Banana	cytosol	59.86	16.8
GSMUA_Achr2P09150_001	Banana	cytosol	61.27	16.67
Bra009859.1-P	Field mustard	nucleus	58.45	16.31
Bra036551.1-P	Field mustard	nucleus	50.0	15.57
GSMUA_Achr6P26760_001	Banana	nucleus	59.86	15.26
GSMUA_Achr3P31550_001	Banana	nucleus	62.68	15.21
Os01t0761100-01	Rice	cytosol, nucleus, plastid	61.97	14.22
Zm00001d043378_P001	Maize	nucleus	59.86	13.91
KXG33424	Sorghum	nucleus	59.86	13.87
Zm00001d012688_P001	Maize	nucleus	59.86	13.84
TraesCS3A01G304800.1	Wheat	plastid	59.15	13.66
HORVU3Hr1G073470.1	Barley	cytosol, nucleus, plastid	58.45	13.56
TraesCS3B01G331700.1	Wheat	plastid	58.45	13.5
TraesCS3D01G297000.1	Wheat	plastid	58.45	13.5
Bra021165.1-P	Field mustard	nucleus	29.58	12.88
Bra001128.1-P	Field mustard	nucleus	28.17	7.68
Bra033920.1-P	Field mustard	plastid	30.99	7.65
Bra023810.1-P	Field mustard	nucleus, plastid	31.69	7.6
Bra023807.1-P	Field mustard	nucleus	9.86	7.49
Bra036900.1-P	Field mustard	nucleus, plastid	31.69	6.98
Bra033919.1-P	Field mustard	nucleus	30.99	5.88
Bra001884.1-P	Field mustard	nucleus, plastid	32.39	3.76
Bra041164.1-P	Field mustard	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Bra025590.1	EnsemblPlants:Bra025590.1-P	EnsemblPlantsGene:Bra025590	InterPro:CRC	InterPro:IPR005172	InterPro:Lin-54_fam
InterPro:Tesmin/TSO1-like_CXC	PANTHER:PTHR12446	PANTHER:PTHR12446:SF14	PFAM:PF03638	PFscan:PS51634	SMART:SM01114
UniParc:UPI0002544D24	UniProt:M4E9Y3	MapMan:15.5.9	:	:	:

Description

AT4G29000 (E=3e-038) | tesmin/TSO1-like CXC domain-containing protein

Coordinates

chrA04:+:7651877..7652494

Molecular Weight (calculated)

15872.5 Da

IEP (calculated)

6.492

GRAVY (calculated)

-0.585

Length

142 amino acids

Sequence
(BLAST)

001: MYLIGFVSGT YCDGWNCVNC FNKVDNEPAR RDAAETTMER NPNAFSPKKL LAEEIGKVVL LGKHNKGCHC KKSGYFKKYC ECFQANNLCS ENWDCKNFEG
101: SEERQALFHG EHANNIAYLH QEANAAIHEA VGSSGFSLSP EP

Best Arabidopsis Sequence Match ( AT2G20110.1 )
(BLAST)

001: MGEGEEGDKF PPKTDEVTQE SMKSARQLDF TGGSSDVEHS HSNQASSMAA ASIPSPIVTV TRPIITSQAP PTVATPIPPP PQSQGIILHV PIRHPRPESP
101: NSMPRPAGET RDGTPQKKKQ CNCKHSRCLK LYCECFASGT YCDGCNCVNC FNNVENEPAR RQAVESTLER NPNAFRPKIA ASPHGGRDNR EEVGDVVMLA
201: RHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCLDCKNFE GSEVRQSLFH GEHSHNLAYL QHANAAITGA IGSSGFASAP PPKRRKGQEI FFNQGTKDSS
301: THRLGQANNG RTTSSQTGSR AGGNASLGPS KVVYKSLLAN IIKPMDVKAL CSVLVAVAGE AAKTLTEKRL ANQKETSVAS SVQDQGHVNN KAEKSGLEDS
401: NADGSKGRSL SPETLALMCD ERDTMLMVAA SPNCSVEPTS QLPNGQDQVY AEQEKVVLTK FRDCLNRIIS CGEVKESNCS MSRMDLDTPV QTTVRIDPVV
501: QQAPVANGVS QTAKQPSQLN TTTPNTSSQT ANGVSQTAKQ PSQLTTTTTT PNTSSQTHLH KTPALSEKKD L

Arabidopsis Description

Tesmin/TSO1-like CXC domain-containing protein [Source:TAIR;Acc:AT2G20110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.